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OPENSEQ.org
L07 - S14
UniProt: Q8VVE2 - Q5SHQ1
Length: 186
Sequences: 1168
Seq/Len: 6.28
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00N 2j01L 2j02N 2j03LContact Map
3i8f3i8gQ 3i8hQ 3i8iIJContact Map
4kd84kd8N 4kd9e 4kdaN 4kdbeContact Map
4kcy4kcyN 4kcze 4kd0N 4kd2eContact Map
4kbt4kbtN 4kbue 4kbvN 4kbweContact Map
4kdg4kdgN 4kdhe 4kdjN 4kdkeContact Map
1yl31yl3IJ 1yl4QContact Map
1gix1gixQ 1giyJIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
123_E 53_L 0.78 0.00
65_K 53_L 0.76 0.00
25_D 31_R 0.59 0.00
13_S 49_H 0.57 0.00
114_K 22_T 0.54 0.00
43_A 40_C 0.53 0.00
81_I 57_R 0.52 0.00
72_L 40_C 0.51 0.00
94_E 34_Y 0.48 0.00
83_G 57_R 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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