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OPENSEQ.org
L07 - S03
UniProt: Q8VVE2 - P80372
Length: 364
Sequences: 1142
Seq/Len: 3.40
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00C 2j01L 2j02C 2j03LContact Map
4kix4kix6 4kiyC 4kj0C 4kj2C 4kj4CContact Map
3i8f3i8gF 3i8hF 3i8iIJContact Map
3sfs3sfsC 3sgfLKMJContact Map
4kd84kd8C 4kd9e 4kdaC 4kdbeContact Map
4kcy4kcyC 4kcze 4kd0C 4kd2eContact Map
3uoq3uoqC 3uosKLMJContact Map
4kbt4kbtC 4kbue 4kbvC 4kbweContact Map
4kdg4kdgC 4kdhe 4kdjC 4kdkeContact Map
1yl31yl3IJ 1yl4FContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
17_V 135_K 0.85 0.00
109_E 154_S 0.82 0.00
120_A 68_V 0.82 0.00
22_Q 161_E 0.80 0.00
16_T 41_G 0.80 0.00
124_L 110_N 0.79 0.00
94_E 91_L 0.78 0.00
58_T 32_L 0.76 0.00
27_L 98_N 0.75 0.00
8_I 101_L 0.74 0.00
49_A 111_L 0.74 0.00
114_K 72_K 0.74 0.00
72_L 82_E 0.74 0.00
8_I 138_V 0.73 0.00
23_L 33_L 0.71 0.00
109_E 207_V 0.70 0.00
52_A 41_G 0.70 0.00
113_K 72_K 0.68 0.00
8_I 51_G 0.68 0.00
116_E 160_A 0.68 0.00
45_P 87_L 0.67 0.00
95_K 15_T 0.66 0.00
70_K 18_W 0.66 0.00
114_K 66_V 0.66 0.00
30_A 80_G 0.66 0.00
82_T 18_W 0.65 0.00
1_M 158_G 0.65 0.00
91_D 23_Y 0.65 0.00
19_E 101_L 0.64 0.00
52_A 106_V 0.64 0.00
115_L 198_V 0.64 0.00
102_G 143_E 0.63 0.00
20_L 21_R 0.63 0.00
23_L 79_R 0.63 0.00
45_P 26_K 0.63 0.00
19_E 200_A 0.63 0.00
18_L 32_L 0.62 0.00
14_Q 202_I 0.62 0.00
32_G 135_K 0.61 0.00
18_L 21_R 0.61 0.00
22_Q 200_A 0.61 0.00
30_A 204_L 0.61 0.00
70_K 198_V 0.61 0.00
22_Q 141_V 0.60 0.00
94_E 80_G 0.60 0.00
42_A 38_R 0.60 0.00
50_A 8_I 0.60 0.00
43_A 139_Q 0.60 0.00
2_A 16_R 0.59 0.00
61_D 152_I 0.59 0.00
106_Q 111_L 0.59 0.00
94_E 83_R 0.59 0.00
12_L 84_I 0.59 0.00
94_E 14_I 0.58 0.00
121_V 106_V 0.58 0.00
77_E 100_A 0.58 0.00
72_L 149_A 0.58 0.00
27_L 104_Q 0.58 0.00
21_K 129_A 0.58 0.00
30_A 169_A 0.58 0.00
52_A 147_K 0.58 0.00
25_D 203_F 0.58 0.00
117_A 45_K 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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