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OPENSEQ.org
L07 - L34
UniProt: Q8VVE2 - P80340
Length: 174
Sequences: 939
Seq/Len: 5.56
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01L7 2j03L7Contact Map
4kix4kix62 4kiz2 4kj12 4kj32Contact Map
3i8f3i8f7 3i8iIJ7Contact Map
3sfs3sgfLKMJ6Contact Map
2zjq2zjq52Contact Map
4kcy4kcze7 4kd2e7Contact Map
4kd84kd9e7 4kdbe7Contact Map
3uoq3uosKLMJ6Contact Map
4kbt4kbue7 4kbwe7Contact Map
4kdg4kdhe7 4kdke7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_L 3_R 0.66 0.00
97_G 15_T 0.66 0.00
97_G 33_R 0.65 0.00
63_I 9_R 0.63 0.00
67_A 16_H 0.61 0.00
82_T 31_L 0.59 0.00
20_L 15_T 0.58 0.00
82_T 1_M 0.57 0.00
8_I 13_A 0.56 0.00
20_L 11_K 0.56 0.00
28_K 43_T 0.55 0.00
115_L 2_K 0.54 0.00
32_G 31_L 0.53 0.00
107_E 9_R 0.52 0.00
94_E 14_K 0.52 0.00
75_I 7_P 0.52 0.00
1_M 3_R 0.50 0.00
99_V 10_R 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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