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OPENSEQ.org
L07 - L32
UniProt: Q8VVE2 - P80339
Length: 185
Sequences: 925
Seq/Len: 5.08
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01L5 2j03L5Contact Map
4kix4kix60 4kiz0 4kj10 4kj30Contact Map
3i8f3i8f5 3i8iIJ5Contact Map
3sfs3sgfLKMJ4Contact Map
2zjq2zjq5ZContact Map
4kcy4kcze5 4kd2e5Contact Map
4kd84kd9e5 4kdbe5Contact Map
3uoq3uosKLMJ4Contact Map
4kbt4kbue5 4kbwe5Contact Map
4kdg4kdhe5 4kdke5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
99_V 42_P 0.71 0.00
68_G 10_K 0.67 0.00
99_V 28_P 0.66 0.00
94_E 16_R 0.60 0.00
111_I 51_Y 0.58 0.00
34_T 30_L 0.57 0.00
16_T 12_S 0.56 0.00
25_D 12_S 0.56 0.00
57_K 54_G 0.55 0.00
38_P 45_V 0.55 0.00
77_E 54_G 0.54 0.00
1_M 22_H 0.53 0.00
88_E 14_A 0.53 0.00
100_K 15_R 0.52 0.00
70_K 17_D 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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