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OPENSEQ.org
L07 - L28
UniProt: Q8VVE2 - P60494
Length: 223
Sequences: 1054
Seq/Len: 5.61
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01L1 2j03L1Contact Map
4kix4kix6X 4kizX 4kj1X 4kj3XContact Map
3i8f3i8fZ 3i8iIJZContact Map
3sfs3sgfLKMJ1Contact Map
2zjq2zjq5UContact Map
4kcy4kcze1 4kd2e1Contact Map
4kd84kd9e1 4kdbe1Contact Map
3uoq3uosKLMJ1Contact Map
4kbt4kbue1 4kbwe1Contact Map
4kdg4kdhe1 4kdke1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_L 47_Q 0.69 0.00
32_G 65_S 0.64 0.00
61_D 37_I 0.60 0.00
94_E 39_K 0.59 0.00
18_L 42_Q 0.59 0.00
22_Q 2_S 0.56 0.00
14_Q 59_T 0.56 0.00
52_A 56_Q 0.56 0.00
34_T 13_I 0.55 0.00
61_D 13_I 0.55 0.00
37_A 59_T 0.55 0.00
70_K 66_H 0.54 0.00
113_K 50_R 0.54 0.00
81_I 18_I 0.54 0.00
110_E 48_K 0.53 0.00
62_V 62_V 0.53 0.00
52_A 73_L 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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