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OPENSEQ.org
L09 - L10
UniProt: Q5SLQ1 - Q8VVE3
Length: 321
Sequences: 1469
Seq/Len: 4.65
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01IJ 2j03IJContact Map
4kix4kixH5 4kizH5 4kj1H5 4kj3HContact Map
4kj54kj5H5 4kj7H 4kj9H5 4kjbHContact Map
3i8f3i8fK 3i8iKYContact Map
3d5a3d5bIJ 3d5dIJContact Map
3kiq3kirIJ 3kitIJContact Map
3pys3pytHI 3pyvHIContact Map
3pyn3pyoHI 3pyrHIContact Map
3kiu3kiwIJ 3kiyIJContact Map
3mr83mrzHI 3ms1HIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
140_L 19_R 1.06 0.05
91_S 87_V 1.05 0.05
57_R 128_L 0.81 0.02
79_I 119_A 0.74 0.02
22_K 155_G 0.71 0.02
88_I 31_G 0.71 0.02
133_H 126_A 0.67 0.01
7_E 122_V 0.66 0.01
98_A 45_K 0.65 0.01
4_I 90_A 0.65 0.01
51_I 60_R 0.64 0.01
110_D 108_K 0.63 0.01
9_L 33_P 0.63 0.01
140_L 151_G 0.63 0.01
121_K 17_L 0.62 0.01
128_L 10_L 0.62 0.01
121_K 82_F 0.61 0.01
140_L 103_G 0.61 0.01
53_A 20_A 0.61 0.01
84_G 38_H 0.61 0.01
109_I 75_Q 0.61 0.01
103_R 42_Q 0.61 0.01
56_K 118_T 0.60 0.01
112_K 114_G 0.60 0.01
38_L 48_G 0.59 0.01
17_Q 43_A 0.59 0.01
91_S 74_L 0.58 0.01
22_K 127_E 0.58 0.01
51_I 59_I 0.58 0.01
89_Y 40_L 0.57 0.01
11_N 17_L 0.57 0.01
83_A 75_Q 0.57 0.01
26_A 112_L 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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