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OPENSEQ.org
L09 - S15
UniProt: Q5SLQ1 - Q5SJ76
Length: 237
Sequences: 1448
Seq/Len: 6.14
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2dI 3v2eO 3v2fIContact Map
2j002j00O 2j01I 2j02O 2j03IContact Map
4kix4kixH 4kiyO 4kizH 4kj0O 4kj1H 4kj2O 4kj3H 4kj4OContact Map
4kj54kj5H 4kj6O 4kj7H 4kj8O 4kj9H 4kjaO 4kjbH 4kjcOContact Map
3uyd3uydR 3uyeK 3uyfR 3uygKContact Map
4gd13r8sH 3r8tH 4gd1O 4gd2OContact Map
3knh3knhO 3kniI 3knjO 3knkIContact Map
3ohc3ohcO 3ohdO 3ohjI 3ohkIContact Map
3ohy3ohyO 3ohzI 3oi0O 3oi1IContact Map
3f1e3f1eO 3f1fI 3f1gO 3f1hIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
54_Q 43_L 0.93 0.01
121_K 35_R 0.85 0.01
142_V 86_G 0.79 0.01
111_P 11_V 0.78 0.01
69_K 68_R 0.76 0.01
146_A 3_I 0.73 0.01
123_L 76_E 0.72 0.01
2_K 48_K 0.70 0.01
144_V 69_Y 0.69 0.01
105_H 29_V 0.68 0.01
53_A 29_V 0.67 0.01
31_L 31_L 0.67 0.01
132_P 82_I 0.67 0.01
38_L 12_I 0.66 0.01
10_E 15_F 0.63 0.01
23_P 40_S 0.62 0.00
110_D 79_R 0.61 0.00
53_A 16_A 0.60 0.00
60_E 20_G 0.60 0.00
134_P 12_I 0.60 0.00
20_D 87_I 0.60 0.00
101_L 37_N 0.58 0.00
81_V 16_A 0.57 0.00
7_E 8_K 0.56 0.00
134_P 52_S 0.56 0.00
27_R 35_R 0.56 0.00
133_H 5_K 0.55 0.00
25_Y 15_F 0.55 0.00
113_R 79_R 0.55 0.00
84_G 61_G 0.55 0.00
95_K 40_S 0.55 0.00
144_V 73_E 0.55 0.00
87_K 87_I 0.55 0.00
136_V 2_P 0.55 0.00
89_Y 50_H 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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