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OPENSEQ.org
L09 - S05
UniProt: Q5SLQ1 - Q5SHQ5
Length: 310
Sequences: 1307
Seq/Len: 4.30
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dI 3v2eE 3v2fIContact Map
2j002j00E 2j01I 2j02E 2j03IContact Map
4kix4kixH 4kiyE 4kizH 4kj0E 4kj1H 4kj2E 4kj3H 4kj4EContact Map
4kj54kj5H 4kj6E 4kj7H 4kj8E 4kj9H 4kjaE 4kjbH 4kjcEContact Map
3uyd3uydH 3uyeK 3uyfH 3uygKContact Map
4gd13r8sH 3r8tH 4gd1E 4gd2EContact Map
3knh3knhE 3kniI 3knjE 3knkIContact Map
3ohc3ohcE 3ohdE 3ohjI 3ohkIContact Map
3ohy3ohyE 3ohzI 3oi0E 3oi1IContact Map
3f1e3f1eE 3f1fI 3f1gE 3f1hIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
88_I 86_A 1.03 0.03
74_N 36_D 0.91 0.02
111_P 13_I 0.91 0.02
135_E 51_V 0.87 0.02
91_S 5_D 0.85 0.02
116_L 67_V 0.85 0.02
121_K 127_N 0.84 0.02
32_P 127_N 0.83 0.01
118_K 8_E 0.83 0.01
113_R 105_V 0.82 0.01
71_I 71_L 0.80 0.01
103_R 150_R 0.78 0.01
82_R 92_K 0.77 0.01
85_E 17_A 0.76 0.01
26_A 91_L 0.74 0.01
70_E 58_A 0.72 0.01
89_Y 82_V 0.72 0.01
82_R 78_H 0.72 0.01
47_L 133_Y 0.71 0.01
137_P 75_T 0.71 0.01
140_L 71_L 0.71 0.01
35_L 76_I 0.70 0.01
29_Y 93_P 0.70 0.01
16_G 80_I 0.70 0.01
7_E 13_I 0.69 0.01
50_R 8_E 0.69 0.01
141_K 51_V 0.68 0.01
78_T 137_E 0.68 0.01
10_E 154_G 0.68 0.01
88_I 36_D 0.68 0.01
113_R 131_I 0.67 0.01
142_V 87_S 0.67 0.01
40_T 148_V 0.67 0.01
14_D 8_E 0.67 0.01
77_L 6_F 0.66 0.01
58_L 27_R 0.66 0.01
22_K 49_P 0.66 0.01
99_E 63_R 0.65 0.01
65_A 36_D 0.65 0.01
142_V 96_P 0.65 0.01
114_L 40_R 0.65 0.01
92_V 146_A 0.64 0.01
29_Y 111_E 0.64 0.01
93_T 135_T 0.64 0.01
29_Y 136_M 0.64 0.01
84_G 131_I 0.64 0.01
25_Y 143_R 0.64 0.01
129_T 141_Q 0.64 0.01
25_Y 144_T 0.64 0.01
77_L 88_K 0.63 0.01
86_T 106_P 0.63 0.01
36_A 93_P 0.63 0.01
96_D 127_N 0.63 0.01
109_I 135_T 0.62 0.01
44_L 8_E 0.62 0.01
127_V 76_I 0.62 0.01
147_Q 116_T 0.62 0.01
26_A 95_A 0.62 0.01
131_K 64_R 0.62 0.01
93_T 8_E 0.62 0.01
113_R 87_S 0.62 0.01
89_Y 16_T 0.62 0.01
55_A 138_A 0.61 0.01
63_A 157_H 0.61 0.01
106_G 136_M 0.61 0.01
60_E 27_R 0.61 0.01
98_A 100_V 0.61 0.01
79_I 148_V 0.61 0.01
84_G 116_T 0.61 0.01
136_V 60_Y 0.61 0.01
104_Q 138_A 0.61 0.01
131_K 69_V 0.60 0.01
11_N 63_R 0.60 0.01
2_K 69_V 0.60 0.01
29_Y 51_V 0.60 0.01
110_D 13_I 0.60 0.01
93_T 10_M 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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