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OPENSEQ.org
L09 - S08
UniProt: Q5SLQ1 - Q5SHQ2
Length: 286
Sequences: 1414
Seq/Len: 5.11
I_Prob: 0.09
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2dI 3v2eH 3v2fIContact Map
2j002j00H 2j01I 2j02H 2j03IContact Map
4kix4kixH 4kiyH 4kizH 4kj0H 4kj1H 4kj2H 4kj3H 4kj4HContact Map
4kj54kj5H 4kj6H 4kj7H 4kj8H 4kj9H 4kjaH 4kjbH 4kjcHContact Map
3uyd3uydK 3uyeK 3uyfK 3uygKContact Map
4gd13r8sH 3r8tH 4gd1H 4gd2HContact Map
3knh3knhH 3kniI 3knjH 3knkIContact Map
3ohc3ohcH 3ohdH 3ohjI 3ohkIContact Map
3f1e3f1eH 3f1fI 3f1gH 3f1hIContact Map
3ohy3ohyH 3ohzI 3oi0H 3oi1IContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_Y 98_K 1.10 0.09
121_K 24_T 0.92 0.05
87_K 32_K 0.88 0.05
84_G 2_L 0.86 0.04
68_L 100_I 0.85 0.04
89_Y 17_T 0.83 0.04
48_E 80_I 0.81 0.04
76_T 52_D 0.78 0.03
101_L 105_R 0.76 0.03
31_L 61_V 0.76 0.03
122_E 135_C 0.75 0.03
12_L 135_C 0.75 0.03
79_I 83_I 0.74 0.03
8_P 21_K 0.74 0.03
127_V 99_E 0.73 0.03
114_L 116_K 0.71 0.02
26_A 50_R 0.70 0.02
23_P 105_R 0.70 0.02
116_L 111_I 0.70 0.02
120_I 45_I 0.69 0.02
126_Y 46_K 0.69 0.02
50_R 112_L 0.69 0.02
87_K 23_S 0.68 0.02
145_V 137_V 0.67 0.02
129_T 116_K 0.67 0.02
100_A 113_S 0.66 0.02
143_S 44_F 0.66 0.02
23_P 133_L 0.65 0.02
86_T 107_L 0.65 0.02
142_V 34_E 0.64 0.02
113_R 100_I 0.64 0.02
63_A 112_L 0.64 0.02
131_K 123_E 0.64 0.02
7_E 20_Y 0.63 0.02
80_P 47_G 0.63 0.02
57_R 90_G 0.62 0.02
33_R 24_T 0.61 0.02
106_G 112_L 0.60 0.02
84_G 79_V 0.60 0.02
84_G 125_R 0.60 0.02
7_E 118_V 0.60 0.01
101_L 98_K 0.60 0.01
111_P 94_Y 0.60 0.01
91_S 83_I 0.60 0.01
7_E 31_F 0.59 0.01
89_Y 136_E 0.59 0.01
34_G 134_I 0.59 0.01
92_V 124_A 0.59 0.01
133_H 107_L 0.59 0.01
32_P 44_F 0.59 0.01
132_P 90_G 0.59 0.01
137_P 45_I 0.58 0.01
116_L 61_V 0.58 0.01
82_R 95_V 0.58 0.01
18_V 88_K 0.58 0.01
29_Y 79_V 0.58 0.01
97_I 116_K 0.58 0.01
131_K 16_A 0.58 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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