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OPENSEQ.org
L09 - L24
UniProt: Q5SLQ1 - Q5SHP9
Length: 258
Sequences: 1503
Seq/Len: 6.08
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dIY 3v2fIYContact Map
2j002j01IY 2j03IYContact Map
4kix4kixHU 4kizHU 4kj1HU 4kj3HUContact Map
4kj54kj5HU 4kj7HU 4kj9HU 4kjbHUContact Map
3uyd3uyeKU 3uygKUContact Map
4gd13r8sHU 3r8tHUContact Map
3ohc3ohjIY 3ohkIYContact Map
3knh3kniIY 3knkIYContact Map
3f1e3f1fIY 3f1hIYContact Map
3ohy3ohzIY 3oi1IYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_L 103_G 0.99 0.03
87_K 26_K 0.77 0.01
29_Y 98_V 0.73 0.01
19_V 46_K 0.69 0.01
119_P 38_I 0.69 0.01
92_V 75_I 0.69 0.01
92_V 49_V 0.69 0.01
66_E 17_S 0.65 0.01
141_K 100_A 0.63 0.01
101_L 10_G 0.63 0.01
33_R 94_K 0.60 0.01
98_A 40_E 0.60 0.01
139_Q 33_K 0.59 0.01
100_A 27_V 0.59 0.01
41_E 66_P 0.58 0.01
73_E 12_T 0.58 0.01
83_A 60_F 0.58 0.01
36_A 10_G 0.58 0.01
123_L 49_V 0.58 0.01
91_S 14_L 0.57 0.01
114_L 104_G 0.57 0.01
115_A 35_Y 0.57 0.01
4_I 60_F 0.56 0.01
55_A 96_I 0.55 0.01
34_G 22_G 0.55 0.01
130_Y 15_V 0.55 0.01
96_D 30_V 0.55 0.01
29_Y 61_I 0.54 0.01
92_V 58_G 0.54 0.01
143_S 8_K 0.54 0.01
79_I 29_E 0.54 0.01
70_E 54_K 0.53 0.01
128_L 29_E 0.53 0.01
85_E 98_V 0.53 0.01
97_I 8_K 0.53 0.01
118_K 36_A 0.53 0.01
126_Y 56_P 0.52 0.01
11_N 10_G 0.52 0.01
132_P 86_R 0.52 0.01
121_K 10_G 0.52 0.01
52_R 26_K 0.52 0.01
16_G 84_R 0.52 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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