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OPENSEQ.org
L09 - L22
UniProt: Q5SLQ1 - Q5SHP3
Length: 261
Sequences: 1398
Seq/Len: 5.42
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dIW 3v2fIWContact Map
2j002j01IW 2j03IWContact Map
4kix4kixHS 4kizHS 4kj1HS 4kj3HSContact Map
4kj54kj5HS 4kj7HS 4kj9HS 4kjbHSContact Map
3uyd3uyeKS 3uygKSContact Map
4gd13r8sHS 3r8tHSContact Map
3ohc3ohjIW 3ohkIWContact Map
3knh3kniIW 3knkIWContact Map
3ohy3ohzIW 3oi1IWContact Map
3f1e3f1fIW 3f1hIWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
122_E 71_V 0.90 0.01
6_L 90_R 0.86 0.01
26_A 24_I 0.85 0.01
27_R 92_R 0.83 0.01
7_E 67_D 0.82 0.01
87_K 99_R 0.80 0.01
132_P 71_V 0.79 0.01
81_V 99_R 0.74 0.00
43_N 43_G 0.74 0.00
85_E 93_A 0.71 0.00
19_V 60_N 0.69 0.00
1_M 29_L 0.69 0.00
121_K 78_E 0.68 0.00
32_P 102_H 0.67 0.00
120_I 43_G 0.67 0.00
26_A 30_E 0.66 0.00
41_E 33_R 0.66 0.00
40_T 68_R 0.66 0.00
4_I 81_A 0.64 0.00
10_E 101_S 0.64 0.00
89_Y 90_R 0.64 0.00
25_Y 49_K 0.63 0.00
47_L 25_R 0.63 0.00
56_K 65_L 0.62 0.00
121_K 43_G 0.62 0.00
29_Y 21_V 0.62 0.00
83_A 71_V 0.61 0.00
37_V 99_R 0.61 0.00
82_R 15_R 0.61 0.00
49_A 107_L 0.60 0.00
103_R 70_Y 0.60 0.00
61_R 82_L 0.59 0.00
3_V 93_A 0.59 0.00
111_P 106_I 0.59 0.00
52_R 82_L 0.58 0.00
39_A 59_V 0.58 0.00
79_I 76_V 0.58 0.00
32_P 9_Y 0.57 0.00
134_P 65_L 0.57 0.00
134_P 109_E 0.57 0.00
52_R 97_K 0.57 0.00
144_V 64_M 0.56 0.00
47_L 107_L 0.56 0.00
36_A 19_L 0.56 0.00
121_K 71_V 0.55 0.00
74_N 95_I 0.55 0.00
125_E 1_M 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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