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OPENSEQ.org
L09 - S19
UniProt: Q5SLQ1 - Q5SHP2
Length: 241
Sequences: 1375
Seq/Len: 5.80
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cS 3v2dI 3v2eS 3v2fIContact Map
2j002j00S 2j01I 2j02S 2j03IContact Map
4kix4kixH 4kiyS 4kizH 4kj0S 4kj1H 4kj2S 4kj3H 4kj4SContact Map
4kj54kj5H 4kj6S 4kj7H 4kj8S 4kj9H 4kjaS 4kjbH 4kjcSContact Map
3uyd3uydV 3uyeK 3uyfV 3uygKContact Map
4gd13r8sH 3r8tH 4gd1S 4gd2SContact Map
3knh3knhS 3kniI 3knjS 3knkIContact Map
3ohc3ohcS 3ohdS 3ohjI 3ohkIContact Map
3f1e3f1eS 3f1fI 3f1gS 3f1hIContact Map
3ohy3ohyS 3ohzI 3oi0S 3oi1IContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
43_N 44_M 0.96 0.02
95_K 65_N 0.95 0.02
10_E 57_H 0.92 0.01
69_K 29_R 0.91 0.01
10_E 67_V 0.88 0.01
93_T 62_I 0.86 0.01
126_Y 41_V 0.81 0.01
33_R 80_Y 0.80 0.01
101_L 85_K 0.78 0.01
103_R 31_I 0.76 0.01
69_K 89_A 0.74 0.01
141_K 75_A 0.73 0.01
53_A 30_L 0.73 0.01
97_I 74_F 0.72 0.01
86_T 57_H 0.70 0.01
43_N 2_P 0.69 0.01
53_A 53_N 0.68 0.01
104_Q 62_I 0.68 0.01
57_R 76_P 0.67 0.01
64_E 62_I 0.67 0.01
118_K 49_I 0.66 0.01
123_L 2_P 0.66 0.01
18_V 2_P 0.65 0.01
56_K 37_R 0.65 0.01
133_H 44_M 0.65 0.01
57_R 28_K 0.64 0.01
91_S 29_R 0.63 0.01
126_Y 10_F 0.63 0.01
53_A 44_M 0.62 0.01
80_P 62_I 0.62 0.01
72_L 32_K 0.62 0.01
33_R 21_E 0.62 0.01
85_E 30_L 0.62 0.01
56_K 44_M 0.61 0.01
40_T 58_V 0.61 0.01
60_E 37_R 0.61 0.01
26_A 65_N 0.59 0.01
34_G 11_V 0.59 0.01
121_K 46_G 0.58 0.01
79_I 16_L 0.58 0.01
96_D 19_V 0.58 0.01
26_A 21_E 0.58 0.01
104_Q 45_V 0.58 0.01
57_R 58_V 0.57 0.01
25_Y 28_K 0.57 0.01
128_L 43_E 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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