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OPENSEQ.org
L09 - S10
UniProt: Q5SLQ1 - Q5SHN7
Length: 253
Sequences: 1289
Seq/Len: 5.24
I_Prob: 0.53
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2dI 3v2eJ 3v2fIContact Map
2j002j00J 2j01I 2j02J 2j03IContact Map
4kix4kixH 4kiyJ 4kizH 4kj0J 4kj1H 4kj2J 4kj3H 4kj4JContact Map
4kj54kj5H 4kj6J 4kj7H 4kj8J 4kj9H 4kjaJ 4kjbH 4kjcJContact Map
3uyd3uydM 3uyeK 3uyfM 3uygKContact Map
4gd13r8sH 3r8tH 4gd1J 4gd2JContact Map
3ohc3ohcJ 3ohdJ 3ohjI 3ohkIContact Map
3knh3knhJ 3kniI 3knjJ 3knkIContact Map
3f1e3f1eJ 3f1fI 3f1gJ 3f1hIContact Map
3ohy3ohyJ 3ohzI 3oi0J 3oi1IContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_D 92_T 1.31 0.53
93_T 59_S 1.01 0.27
34_G 45_R 0.95 0.21
65_A 54_F 0.88 0.17
121_K 14_K 0.86 0.16
89_Y 74_I 0.86 0.16
84_G 100_T 0.86 0.16
33_R 43_R 0.85 0.15
122_E 65_L 0.85 0.15
88_I 53_P 0.84 0.14
36_A 53_P 0.84 0.14
39_A 30_S 0.82 0.14
68_L 43_R 0.81 0.13
113_R 96_I 0.80 0.12
39_A 81_T 0.77 0.11
126_Y 53_P 0.77 0.11
50_R 11_F 0.77 0.11
101_L 20_A 0.77 0.11
18_V 33_Q 0.76 0.10
19_V 6_I 0.75 0.10
1_M 81_T 0.75 0.10
31_L 46_R 0.75 0.10
133_H 11_F 0.75 0.10
89_Y 54_F 0.74 0.10
114_L 19_S 0.74 0.10
2_K 72_V 0.73 0.09
111_P 49_V 0.73 0.09
40_T 71_L 0.73 0.09
35_L 43_R 0.72 0.09
40_T 13_H 0.72 0.09
93_T 95_E 0.71 0.09
59_A 66_R 0.70 0.08
87_K 88_L 0.69 0.08
93_T 48_T 0.69 0.07
61_R 18_A 0.68 0.07
44_L 50_I 0.68 0.07
111_P 54_F 0.68 0.07
123_L 38_I 0.67 0.07
43_N 45_R 0.67 0.07
1_M 69_N 0.67 0.07
11_N 90_L 0.67 0.07
93_T 63_F 0.67 0.07
47_L 62_H 0.67 0.07
12_L 44_V 0.67 0.07
73_E 11_F 0.66 0.07
26_A 96_I 0.66 0.07
26_A 26_A 0.66 0.07
122_E 75_I 0.65 0.07
121_K 51_R 0.64 0.06
136_V 92_T 0.64 0.06
96_D 30_S 0.64 0.06
10_E 52_G 0.64 0.06
60_E 10_G 0.64 0.06
14_D 16_L 0.64 0.06
12_L 53_P 0.64 0.06
115_A 72_V 0.63 0.06
5_L 15_T 0.63 0.06
47_L 22_K 0.63 0.06
139_Q 38_I 0.62 0.06
77_L 18_A 0.62 0.06
77_L 65_L 0.62 0.05
85_E 56_H 0.62 0.05
112_K 56_H 0.61 0.05
84_G 97_E 0.61 0.05
70_E 75_I 0.61 0.05
116_L 81_T 0.61 0.05
53_A 16_L 0.61 0.05
22_K 4_I 0.61 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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