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OPENSEQ.org
L09 - S09
UniProt: Q5SLQ1 - P80374
Length: 276
Sequences: 1410
Seq/Len: 5.20
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dI 3v2eI 3v2fIContact Map
2j002j00I 2j01I 2j02I 2j03IContact Map
4kix4kixH 4kiyI 4kizH 4kj0I 4kj1H 4kj2I 4kj3H 4kj4IContact Map
4kj54kj5H 4kj6I 4kj7H 4kj8I 4kj9H 4kjaI 4kjbH 4kjcIContact Map
3uyd3uydL 3uyeK 3uyfL 3uygKContact Map
4gd13r8sH 3r8tH 4gd1I 4gd2IContact Map
3ohc3ohcI 3ohdI 3ohjI 3ohkIContact Map
3knh3knhI 3kniI 3knjI 3knkIContact Map
3f1e3f1eI 3f1fI 3f1gI 3f1hIContact Map
3ohy3ohyI 3ohzI 3oi0I 3oi1IContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_R 37_F 0.93 0.01
26_A 20_R 0.86 0.01
81_V 18_F 0.83 0.01
87_K 58_H 0.80 0.01
86_T 75_D 0.79 0.01
50_R 79_L 0.78 0.01
42_S 12_E 0.77 0.01
32_P 37_F 0.77 0.01
83_A 75_D 0.75 0.01
112_K 82_A 0.72 0.01
92_V 126_S 0.71 0.01
9_L 30_G 0.71 0.01
92_V 70_K 0.70 0.01
3_V 36_Y 0.70 0.01
27_R 41_V 0.70 0.01
19_V 60_D 0.68 0.00
48_E 13_A 0.67 0.00
138_I 46_A 0.67 0.00
55_A 109_V 0.67 0.00
143_S 59_F 0.66 0.00
126_Y 88_Y 0.66 0.00
8_P 13_A 0.65 0.00
145_V 13_A 0.64 0.00
12_L 23_N 0.64 0.00
15_V 106_A 0.63 0.00
96_D 54_D 0.63 0.00
126_Y 92_Y 0.62 0.00
17_Q 13_A 0.61 0.00
108_T 13_A 0.61 0.00
58_L 117_H 0.61 0.00
126_Y 19_L 0.60 0.00
142_V 121_R 0.60 0.00
33_R 26_V 0.60 0.00
138_I 63_I 0.59 0.00
87_K 89_N 0.59 0.00
63_A 81_I 0.59 0.00
98_A 109_V 0.59 0.00
66_E 28_V 0.59 0.00
69_K 43_A 0.59 0.00
72_L 54_D 0.59 0.00
99_E 81_I 0.58 0.00
79_I 100_G 0.58 0.00
109_I 81_I 0.58 0.00
101_L 123_P 0.58 0.00
86_T 125_Y 0.57 0.00
60_E 79_L 0.57 0.00
103_R 57_G 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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