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OPENSEQ.org
L09 - L28
UniProt: Q5SLQ1 - P60494
Length: 246
Sequences: 1327
Seq/Len: 6.32
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dI1 3v2fI1Contact Map
2j002j01I1 2j03I1Contact Map
4kix4kixHX 4kizHX 4kj1HX 4kj3HXContact Map
4kj54kj5HX 4kj7HX 4kj9HX 4kjbHXContact Map
3uyd3uyeKZ 3uygKZContact Map
3v223v23I1 3v25I1Contact Map
4gd13r8sHX 3r8tHXContact Map
3uz63uz8KZ 3uz9KZContact Map
3ohc3ohjI1 3ohkI1Contact Map
3knh3kniI1 3knkI1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
93_T 12_P 0.79 0.00
45_K 18_I 0.75 0.00
89_Y 62_V 0.73 0.00
112_K 14_V 0.67 0.00
37_V 67_I 0.67 0.00
26_A 3_K 0.67 0.00
44_L 67_I 0.64 0.00
82_R 57_E 0.63 0.00
146_A 48_K 0.63 0.00
59_A 43_Y 0.63 0.00
127_V 17_S 0.63 0.00
119_P 12_P 0.62 0.00
80_P 48_K 0.62 0.00
138_I 38_S 0.61 0.00
63_A 14_V 0.61 0.00
89_Y 51_V 0.61 0.00
7_E 2_S 0.59 0.00
112_K 63_A 0.57 0.00
25_Y 35_T 0.57 0.00
112_K 62_V 0.57 0.00
120_I 2_S 0.57 0.00
40_T 58_I 0.56 0.00
76_T 59_T 0.56 0.00
45_K 2_S 0.56 0.00
101_L 17_S 0.56 0.00
114_L 55_G 0.56 0.00
93_T 63_A 0.56 0.00
115_A 4_V 0.55 0.00
41_E 50_R 0.55 0.00
69_K 68_P 0.55 0.00
91_S 36_G 0.55 0.00
61_R 11_R 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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