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OPENSEQ.org
L09 - L19
UniProt: Q5SLQ1 - P60490
Length: 294
Sequences: 1418
Seq/Len: 5.43
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dIT 3v2fITContact Map
2j002j01IT 2j03ITContact Map
4kix4kixHP 4kizHP 4kj1HP 4kj3HPContact Map
4kj54kj5HP 4kj7HP 4kj9HP 4kjbHPContact Map
3uyd3uyeKR 3uygKRContact Map
3v223v23IT 3v25ITContact Map
4gd13r8sHP 3r8tHPContact Map
3uz63uz8KR 3uz9KRContact Map
3ohc3ohjIT 3ohkITContact Map
3knh3kniIT 3knkITContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_P 70_V 0.92 0.01
134_P 34_V 0.90 0.01
96_D 42_I 0.83 0.01
92_V 60_T 0.81 0.01
15_V 59_T 0.79 0.01
115_A 89_V 0.78 0.01
87_K 53_R 0.76 0.01
4_I 65_K 0.76 0.01
114_L 10_V 0.73 0.01
140_L 80_S 0.72 0.01
94_A 65_K 0.72 0.01
14_D 93_R 0.72 0.01
26_A 70_V 0.71 0.01
48_E 28_V 0.70 0.01
123_L 105_L 0.69 0.01
92_V 100_Y 0.66 0.00
72_L 45_F 0.66 0.00
39_A 102_I 0.65 0.00
82_R 33_K 0.64 0.00
9_L 18_D 0.63 0.00
96_D 76_F 0.62 0.00
70_E 21_E 0.62 0.00
14_D 46_E 0.61 0.00
25_Y 16_R 0.61 0.00
87_K 33_K 0.61 0.00
6_L 39_R 0.59 0.00
128_L 88_I 0.59 0.00
97_I 69_G 0.59 0.00
20_D 18_D 0.59 0.00
116_L 40_T 0.59 0.00
98_A 88_I 0.58 0.00
108_T 86_I 0.58 0.00
31_L 55_N 0.58 0.00
121_K 53_R 0.58 0.00
92_V 75_I 0.58 0.00
68_L 88_I 0.57 0.00
47_L 65_K 0.57 0.00
25_Y 101_F 0.57 0.00
140_L 6_L 0.57 0.00
26_A 105_L 0.57 0.00
42_S 79_H 0.56 0.00
8_P 39_R 0.56 0.00
52_R 67_S 0.56 0.00
21_V 65_K 0.56 0.00
79_I 84_Q 0.56 0.00
34_G 104_N 0.56 0.00
61_R 93_R 0.56 0.00
91_S 61_F 0.56 0.00
4_I 67_S 0.56 0.00
96_D 6_L 0.55 0.00
132_P 96_R 0.55 0.00
142_V 109_E 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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