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OPENSEQ.org
L09 - L13
UniProt: Q5SLQ1 - P60488
Length: 288
Sequences: 1433
Seq/Len: 4.99
I_Prob: 0.15
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dIN 3v2fINContact Map
2j002j01IN 2j03INContact Map
4kix4kixHJ 4kizHJ 4kj1HJ 4kj3HJContact Map
4kj54kj5HJ 4kj7HJ 4kj9HJ 4kjbHJContact Map
3uyd3uyeKM 3uygKMContact Map
4gd13r8sHJ 3r8tHJContact Map
3ohc3ohjIN 3ohkINContact Map
3knh3kniIN 3knkINContact Map
3ohy3ohzIN 3oi1INContact Map
3v223v23IN 3v25INContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
76_T 140_V 1.15 0.15
3_V 20_G 0.90 0.07
20_D 42_W 0.82 0.05
133_H 79_P 0.82 0.05
34_G 117_F 0.77 0.04
66_E 45_N 0.70 0.03
93_T 51_F 0.69 0.03
22_K 3_T 0.69 0.03
143_S 53_V 0.68 0.03
147_Q 109_K 0.68 0.03
110_D 52_V 0.66 0.03
2_K 76_S 0.66 0.03
132_P 79_P 0.65 0.03
58_L 121_K 0.64 0.03
142_V 85_I 0.64 0.03
128_L 45_N 0.63 0.02
39_A 43_T 0.63 0.02
25_Y 30_I 0.63 0.02
16_G 20_G 0.62 0.02
130_Y 71_I 0.62 0.02
46_A 54_V 0.60 0.02
57_R 118_K 0.60 0.02
123_L 110_G 0.60 0.02
47_L 110_G 0.60 0.02
122_E 84_K 0.60 0.02
9_L 20_G 0.60 0.02
37_V 9_V 0.60 0.02
81_V 76_S 0.59 0.02
110_D 107_L 0.59 0.02
121_K 91_L 0.59 0.02
67_R 28_T 0.59 0.02
142_V 65_K 0.58 0.02
64_E 99_L 0.58 0.02
59_A 105_G 0.58 0.02
86_T 10_E 0.57 0.02
29_Y 104_K 0.57 0.02
85_E 54_V 0.57 0.02
143_S 90_M 0.56 0.02
39_A 72_Y 0.56 0.02
27_R 1_M 0.55 0.02
121_K 22_T 0.55 0.02
92_V 58_D 0.54 0.02
9_L 18_A 0.54 0.02
40_T 107_L 0.54 0.02
31_L 30_I 0.54 0.02
21_V 72_Y 0.54 0.02
105_H 60_I 0.54 0.02
96_D 121_K 0.53 0.01
15_V 134_R 0.53 0.01
62_K 104_K 0.53 0.01
56_K 83_K 0.53 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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