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OPENSEQ.org
S18 - S20
UniProt: Q5SLQ0 - P80380
Length: 194
Sequences: 1159
Seq/Len: 7.53
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeRTContact Map
3v2c3v2cRT 3v2eRTContact Map
2uub2uubRTContact Map
2j002j00RT 2j02RTContact Map
3t1y3t1yRTContact Map
2uua2uuaRTContact Map
4b3m4b3mRTContact Map
2uxc2uxcRTContact Map
4kix4kiyRT 4kj0RT 4kj2RT 4kj4RTContact Map
2vqf2vqfRTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_S 24_L 1.02 0.04
75_I 89_R 0.96 0.03
36_N 75_N 0.82 0.02
72_R 15_R 0.77 0.02
70_I 60_E 0.72 0.01
76_L 12_A 0.72 0.01
62_E 34_K 0.69 0.01
51_L 61_S 0.68 0.01
23_K 25_R 0.67 0.01
42_R 11_S 0.67 0.01
81_F 39_K 0.66 0.01
50_I 69_G 0.65 0.01
57_G 64_D 0.64 0.01
51_L 12_A 0.64 0.01
22_V 22_R 0.63 0.01
81_F 34_K 0.62 0.01
19_K 35_T 0.62 0.01
47_T 66_A 0.61 0.01
37_V 76_A 0.61 0.01
31_L 72_L 0.60 0.01
60_A 90_Q 0.60 0.01
19_K 82_S 0.60 0.01
62_E 80_R 0.58 0.01
70_I 58_K 0.58 0.01
21_K 59_A 0.57 0.01
49_K 15_R 0.57 0.01
17_S 10_L 0.56 0.01
78_L 72_L 0.55 0.01
31_L 49_A 0.55 0.01
37_V 67_A 0.55 0.01
41_K 25_R 0.55 0.01
59_S 29_K 0.54 0.01
61_K 20_L 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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