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OPENSEQ.org
L01 - L10
UniProt: Q5SLP7 - Q8VVE3
Length: 402
Sequences: 1331
Seq/Len: 3.36
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CJ 2j03CJContact Map
3kiq3kirCJ 3kitCJContact Map
3kiu3kiwCJ 3kiyCJContact Map
3o2z3o58A 3o5hAMContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_P 125_L 0.94 0.01
168_K 109_S 0.90 0.00
113_A 49_A 0.89 0.00
217_T 109_S 0.73 0.00
165_R 77_P 0.71 0.00
172_I 39_A 0.70 0.00
166_N 1_M 0.69 0.00
128_L 76_G 0.68 0.00
141_P 145_P 0.68 0.00
211_R 74_L 0.67 0.00
203_E 164_L 0.66 0.00
214_Y 146_M 0.64 0.00
5_G 96_F 0.64 0.00
199_A 27_V 0.63 0.00
166_N 125_L 0.62 0.00
162_I 26_L 0.62 0.00
163_E 110_G 0.62 0.00
30_V 127_E 0.62 0.00
101_I 24_F 0.61 0.00
77_A 77_P 0.61 0.00
111_F 110_G 0.61 0.00
128_L 113_Q 0.61 0.00
49_G 7_V 0.60 0.00
67_H 80_V 0.60 0.00
52_P 58_L 0.60 0.00
63_V 130_T 0.60 0.00
109_M 142_L 0.59 0.00
86_E 52_F 0.59 0.00
126_S 37_T 0.58 0.00
173_H 58_L 0.58 0.00
103_K 46_Q 0.57 0.00
59_V 43_A 0.57 0.00
73_V 43_A 0.57 0.00
74_R 68_L 0.57 0.00
172_I 149_L 0.57 0.00
113_A 146_M 0.56 0.00
105_L 150_V 0.56 0.00
161_R 49_A 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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