May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
L01 - L07
UniProt: Q5SLP7 - Q8VVE2
Length: 354
Sequences: 1445
Seq/Len: 4.11
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CL 2j03CLContact Map
4kcy4kczCe 4kd2CeContact Map
4kd84kd9Ce 4kdbCeContact Map
4kbt4kbuCe 4kbwCeContact Map
4kdg4kdhCe 4kdkCeContact Map
1yl31yl3CIJContact Map
1gix1giyCJIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
99_E 66_E 0.73 0.00
135_R 49_A 0.67 0.00
130_R 9_K 0.62 0.00
217_T 12_L 0.62 0.00
131_I 95_K 0.58 0.00
183_P 124_L 0.58 0.00
186_L 24_I 0.57 0.00
130_R 27_L 0.56 0.00
55_S 22_Q 0.56 0.00
116_A 6_E 0.56 0.00
196_A 97_G 0.56 0.00
113_A 23_L 0.56 0.00
114_V 26_A 0.55 0.00
159_A 94_E 0.55 0.00
171_A 96_G 0.55 0.00
164_F 80_A 0.55 0.00
37_K 113_K 0.55 0.00
156_E 46_A 0.55 0.00
85_K 92_L 0.54 0.00
73_V 63_I 0.54 0.00
72_Q 121_V 0.53 0.00
170_G 23_L 0.53 0.00
110_D 53_P 0.52 0.00
77_A 97_G 0.52 0.00
183_P 107_E 0.52 0.00
73_V 94_E 0.52 0.00
186_L 104_S 0.51 0.00
101_I 52_A 0.51 0.00
213_V 18_L 0.51 0.00
151_G 61_D 0.51 0.00
128_L 110_E 0.51 0.00
53_R 9_K 0.51 0.00
174_A 27_L 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.9182 seconds.