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OPENSEQ.org
L01 - S06
UniProt: Q5SLP7 - Q5SLP8
Length: 330
Sequences: 1177
Seq/Len: 3.61
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00F 2j01C 2j02F 2j03CContact Map
4juw4juwF 4juxCContact Map
3knh3knhF 3kniC 3knjF 3knkCContact Map
2y102y10F 2y11C 2y18F 2y19CContact Map
3zn73zn7F 3zn9C 3zndF 3zneCContact Map
2y142y14F 2y15C 2y16F 2y17CContact Map
3huw3huwF 3huxC 3huyF 3huzCContact Map
2y0u2y0uF 2y0vC 2y0wF 2y0xCContact Map
2xqd2xqdF 2xqeCContact Map
2x9r2x9rF 2x9sC 2x9tF 2x9uCContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
186_L 85_V 0.84 0.00
115_V 72_V 0.81 0.00
218_T 34_G 0.80 0.00
72_Q 85_V 0.75 0.00
116_A 35_A 0.74 0.00
171_A 62_W 0.70 0.00
69_L 87_R 0.69 0.00
110_D 48_L 0.67 0.00
213_V 53_A 0.67 0.00
79_A 77_R 0.66 0.00
172_I 33_Y 0.65 0.00
43_E 51_P 0.65 0.00
1_M 53_A 0.65 0.00
225_I 28_R 0.64 0.00
198_E 46_R 0.63 0.00
178_K 88_V 0.63 0.00
25_E 72_V 0.62 0.00
140_N 1_M 0.62 0.00
148_F 2_R 0.62 0.00
77_A 67_M 0.61 0.00
34_A 60_F 0.61 0.00
107_G 34_G 0.61 0.00
208_T 30_L 0.61 0.00
187_A 86_R 0.61 0.00
225_I 22_E 0.61 0.00
59_V 7_N 0.61 0.00
75_V 23_K 0.61 0.00
174_A 36_R 0.60 0.00
157_I 3_R 0.60 0.00
162_I 29_A 0.60 0.00
165_R 7_N 0.60 0.00
58_N 29_A 0.60 0.00
89_E 39_K 0.59 0.00
172_I 9_V 0.59 0.00
40_E 41_E 0.59 0.00
185_K 63_Y 0.59 0.00
178_K 30_L 0.59 0.00
220_G 39_K 0.58 0.00
42_V 48_L 0.58 0.00
182_P 53_A 0.58 0.00
197_L 83_D 0.58 0.00
58_N 93_S 0.58 0.00
193_F 29_A 0.58 0.00
193_F 33_Y 0.58 0.00
168_K 66_E 0.58 0.00
49_G 83_D 0.58 0.00
99_E 70_D 0.58 0.00
53_R 45_L 0.58 0.00
205_A 48_L 0.58 0.00
107_G 18_Q 0.57 0.00
8_Y 71_R 0.57 0.00
219_M 44_G 0.57 0.00
73_V 94_Q 0.57 0.00
99_E 30_L 0.57 0.00
54_R 12_P 0.57 0.00
24_D 37_V 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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