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OPENSEQ.org
L01 - L22
UniProt: Q5SLP7 - Q5SHP3
Length: 342
Sequences: 1527
Seq/Len: 4.52
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CW 2j03CWContact Map
4juw4juxCWContact Map
4btc4btdCWContact Map
3knh3kniCW 3knkCWContact Map
2y102y11CW 2y19CWContact Map
3zn73zn9CW 3zneCWContact Map
2y142y15CW 2y17CWContact Map
3huw3huxCW 3huzCWContact Map
2y0u2y0vCW 2y0xCWContact Map
2xqd2xqeCWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
220_G 67_D 0.91 0.01
124_V 59_V 0.87 0.01
161_R 94_D 0.85 0.01
17_P 63_D 0.71 0.00
186_L 63_D 0.70 0.00
184_E 50_V 0.66 0.00
3_K 51_L 0.65 0.00
161_R 90_R 0.65 0.00
5_G 60_N 0.63 0.00
49_G 2_E 0.62 0.00
170_G 77_D 0.62 0.00
42_V 75_Y 0.62 0.00
126_S 4_K 0.61 0.00
43_E 83_K 0.61 0.00
79_A 77_D 0.61 0.00
128_L 55_A 0.61 0.00
170_G 72_K 0.60 0.00
30_V 28_S 0.59 0.00
25_E 37_R 0.59 0.00
65_L 87_P 0.59 0.00
225_I 70_Y 0.59 0.00
130_R 23_L 0.59 0.00
37_K 73_A 0.58 0.00
171_A 21_V 0.58 0.00
81_G 79_G 0.57 0.00
216_T 51_L 0.57 0.00
53_R 107_L 0.57 0.00
162_I 44_A 0.57 0.00
213_V 60_N 0.57 0.00
52_P 18_R 0.56 0.00
86_E 14_P 0.56 0.00
126_S 2_E 0.56 0.00
22_T 106_I 0.56 0.00
53_R 6_I 0.55 0.00
34_A 29_L 0.55 0.00
119_D 50_V 0.55 0.00
62_T 79_G 0.55 0.00
210_L 94_D 0.55 0.00
55_S 38_Y 0.55 0.00
170_G 15_R 0.54 0.00
10_A 35_I 0.54 0.00
58_N 94_D 0.54 0.00
195_R 85_V 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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