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OPENSEQ.org
L01 - S19
UniProt: Q5SLP7 - Q5SHP2
Length: 322
Sequences: 1470
Seq/Len: 4.64
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00S 2j01C 2j02S 2j03CContact Map
4juw4juwS 4juxCContact Map
3knh3knhS 3kniC 3knjS 3knkCContact Map
2y102y10S 2y11C 2y18S 2y19CContact Map
3zn73zn7S 3zn9C 3zndS 3zneCContact Map
2y142y14S 2y15C 2y16S 2y17CContact Map
3huw3huwS 3huxC 3huyS 3huzCContact Map
2y0u2y0uS 2y0vC 2y0wS 2y0xCContact Map
2xqd2xqdS 2xqeCContact Map
2x9r2x9rS 2x9sC 2x9tS 2x9uCContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_N 57_H 0.95 0.01
9_R 62_I 0.73 0.01
52_P 41_V 0.72 0.01
24_D 45_V 0.71 0.01
204_G 43_E 0.71 0.01
126_S 56_Q 0.71 0.01
226_N 65_N 0.71 0.01
131_I 22_L 0.69 0.01
3_K 5_L 0.69 0.01
191_R 5_L 0.68 0.01
213_V 16_L 0.68 0.01
40_E 44_M 0.64 0.00
35_T 57_H 0.64 0.00
23_I 44_M 0.64 0.00
208_T 88_K 0.64 0.00
155_R 16_L 0.64 0.00
64_S 45_V 0.64 0.00
190_I 57_H 0.63 0.00
39_D 45_V 0.63 0.00
161_R 47_H 0.63 0.00
16_D 16_L 0.63 0.00
135_R 43_E 0.62 0.00
3_K 52_Y 0.62 0.00
168_K 59_P 0.62 0.00
174_A 39_T 0.61 0.00
161_R 23_N 0.61 0.00
10_A 2_P 0.61 0.00
84_I 52_Y 0.61 0.00
47_K 47_H 0.61 0.00
162_I 85_K 0.60 0.00
113_A 44_M 0.60 0.00
148_F 45_V 0.60 0.00
136_G 71_L 0.59 0.00
28_R 84_G 0.59 0.00
216_T 53_N 0.59 0.00
32_E 49_I 0.59 0.00
58_N 41_V 0.58 0.00
11_L 30_L 0.58 0.00
184_E 89_A 0.57 0.00
122_G 39_T 0.57 0.00
163_E 23_N 0.57 0.00
23_I 53_N 0.56 0.00
130_R 81_R 0.56 0.00
183_P 55_K 0.56 0.00
52_P 27_E 0.56 0.00
76_L 29_R 0.55 0.00
11_L 63_T 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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