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OPENSEQ.org
L01 - S09
UniProt: Q5SLP7 - P80374
Length: 357
Sequences: 1586
Seq/Len: 4.49
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00I 2j01C 2j02I 2j03CContact Map
4juw4juwI 4juxCContact Map
3knh3knhI 3kniC 3knjI 3knkCContact Map
2y102y10I 2y11C 2y18I 2y19CContact Map
3zn73zn7I 3zn9C 3zndI 3zneCContact Map
2y142y14I 2y15C 2y16I 2y17CContact Map
3huw3huwI 3huxC 3huyI 3huzCContact Map
2y0u2y0uI 2y0vC 2y0wI 2y0xCContact Map
2xqd2xqdI 2xqeCContact Map
2x9r2x9rI 2x9sC 2x9tI 2x9uCContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
172_I 33_F 0.80 0.00
16_D 97_K 0.80 0.00
166_N 112_K 0.76 0.00
126_S 98_P 0.75 0.00
106_D 91_D 0.73 0.00
102_Q 91_D 0.71 0.00
7_R 41_V 0.70 0.00
123_A 118_K 0.69 0.00
128_L 26_V 0.69 0.00
218_T 78_K 0.69 0.00
69_L 78_K 0.68 0.00
221_P 19_L 0.68 0.00
147_G 126_S 0.68 0.00
194_I 32_D 0.67 0.00
135_R 70_K 0.66 0.00
40_E 5_Y 0.66 0.00
110_D 82_A 0.66 0.00
203_E 27_T 0.66 0.00
213_V 27_T 0.66 0.00
179_A 27_T 0.65 0.00
64_S 41_V 0.65 0.00
141_P 121_R 0.65 0.00
130_R 114_Y 0.64 0.00
128_L 125_Y 0.64 0.00
170_G 109_V 0.64 0.00
187_A 121_R 0.63 0.00
140_N 79_L 0.63 0.00
228_H 35_E 0.63 0.00
213_V 62_Y 0.63 0.00
196_A 92_Y 0.63 0.00
29_L 13_A 0.62 0.00
214_Y 94_A 0.61 0.00
9_R 27_T 0.61 0.00
163_E 97_K 0.61 0.00
162_I 79_L 0.61 0.00
5_G 32_D 0.60 0.00
158_K 60_D 0.60 0.00
215_V 35_E 0.60 0.00
205_A 42_R 0.59 0.00
2_P 61_A 0.59 0.00
17_P 63_I 0.59 0.00
75_V 9_R 0.59 0.00
7_R 65_V 0.59 0.00
32_E 57_G 0.58 0.00
42_V 81_I 0.58 0.00
16_D 121_R 0.58 0.00
97_G 59_F 0.58 0.00
15_V 91_D 0.58 0.00
217_T 59_F 0.58 0.00
227_P 32_D 0.58 0.00
173_H 48_E 0.58 0.00
72_Q 52_A 0.57 0.00
10_A 35_E 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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