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OPENSEQ.org
L01 - S03
UniProt: Q5SLP7 - P80372
Length: 468
Sequences: 1354
Seq/Len: 3.10
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00C 2j01C 2j02C 2j03CContact Map
4juw4juwC 4juxCContact Map
3knh3knhC 3kniC 3knjC 3knkCContact Map
2y102y10C 2y11C 2y18C 2y19CContact Map
3zn73zn7C 3zn9C 3zndC 3zneCContact Map
2y142y14C 2y15C 2y16C 2y17CContact Map
3huw3huwC 3huxC 3huyC 3huzCContact Map
2y0u2y0uC 2y0vC 2y0wC 2y0xCContact Map
2xqd2xqdC 2xqeCContact Map
2x9r2x9rC 2x9sC 2x9tC 2x9uCContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
222_S 23_Y 1.14 0.05
198_E 52_L 1.07 0.04
82_E 6_H 0.92 0.03
80_K 10_F 0.89 0.03
32_E 89_E 0.85 0.02
161_R 61_A 0.83 0.02
190_I 120_V 0.82 0.02
159_A 132_R 0.81 0.02
59_V 185_G 0.80 0.02
54_R 154_S 0.79 0.02
37_K 5_I 0.79 0.02
219_M 129_A 0.78 0.02
170_G 193_Y 0.76 0.02
85_K 91_L 0.75 0.02
114_V 28_Q 0.74 0.01
143_A 65_A 0.72 0.01
12_L 106_V 0.71 0.01
228_H 93_K 0.71 0.01
47_K 106_V 0.70 0.01
123_A 23_Y 0.70 0.01
155_R 54_R 0.69 0.01
40_E 185_G 0.69 0.01
58_N 110_N 0.69 0.01
13_E 141_V 0.68 0.01
212_S 151_V 0.68 0.01
95_V 103_V 0.68 0.01
13_E 31_H 0.68 0.01
103_K 198_V 0.67 0.01
166_N 147_K 0.67 0.01
130_R 162_Q 0.66 0.01
74_R 67_T 0.66 0.01
10_A 31_H 0.66 0.01
185_K 27_K 0.66 0.01
124_V 126_R 0.66 0.01
191_R 195_V 0.66 0.01
108_W 18_W 0.66 0.01
201_K 25_G 0.66 0.01
222_S 196_L 0.65 0.01
176_V 100_A 0.65 0.01
225_I 41_G 0.65 0.01
32_E 32_L 0.65 0.01
114_V 84_I 0.65 0.01
182_P 30_R 0.65 0.01
98_E 134_I 0.64 0.01
17_P 142_M 0.64 0.01
187_A 23_Y 0.64 0.01
104_I 150_K 0.63 0.01
217_T 6_H 0.63 0.01
10_A 141_V 0.63 0.01
128_L 146_A 0.63 0.01
9_R 54_R 0.63 0.01
152_E 151_V 0.63 0.01
162_I 18_W 0.63 0.01
223_V 106_V 0.62 0.01
225_I 198_V 0.62 0.01
186_L 43_L 0.62 0.01
129_G 146_A 0.62 0.01
157_I 102_N 0.62 0.01
67_H 163_A 0.62 0.01
136_G 135_K 0.62 0.01
165_R 99_V 0.62 0.01
28_R 10_F 0.62 0.01
188_D 66_V 0.62 0.01
181_F 58_E 0.62 0.01
135_R 12_L 0.62 0.01
204_G 152_I 0.61 0.01
76_L 97_K 0.61 0.01
7_R 67_T 0.61 0.01
193_F 14_I 0.61 0.01
167_D 165_T 0.61 0.01
55_S 162_Q 0.61 0.01
198_E 124_I 0.61 0.01
96_G 182_I 0.61 0.01
75_V 147_K 0.60 0.01
199_A 88_R 0.60 0.01
167_D 17_D 0.60 0.01
157_I 87_L 0.60 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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