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OPENSEQ.org
L01 - L16
UniProt: Q5SLP7 - P60489
Length: 370
Sequences: 1224
Seq/Len: 3.35
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CQ 2j03CQContact Map
4juw4juxCQContact Map
4btc4btdCQContact Map
3knh3kniCQ 3knkCQContact Map
2y102y11CQ 2y19CQContact Map
3zn73zn9CQ 3zneCQContact Map
2y142y15CQ 2y17CQContact Map
3huw3huxCQ 3huzCQContact Map
2y0u2y0vCQ 2y0xCQContact Map
2xqd2xqeCQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_E 11_K 1.08 0.03
102_Q 110_T 0.82 0.01
169_T 13_Q 0.81 0.01
103_K 59_R 0.76 0.01
143_A 79_L 0.75 0.01
163_E 96_V 0.75 0.01
182_P 45_Q 0.73 0.01
115_V 35_V 0.73 0.01
193_F 92_G 0.71 0.01
197_L 34_L 0.71 0.01
165_R 91_E 0.70 0.01
117_T 76_K 0.69 0.01
126_S 80_E 0.69 0.01
131_I 127_I 0.69 0.01
22_T 33_G 0.67 0.01
28_R 26_Y 0.67 0.01
12_L 110_T 0.67 0.01
213_V 33_G 0.66 0.01
12_L 3_M 0.66 0.01
3_K 132_V 0.66 0.01
130_R 106_V 0.66 0.01
140_N 50_A 0.64 0.01
85_K 132_V 0.63 0.01
193_F 89_N 0.63 0.01
62_T 104_F 0.63 0.01
130_R 39_P 0.63 0.01
152_E 52_V 0.63 0.01
53_R 12_Q 0.62 0.01
54_R 101_R 0.62 0.01
47_K 35_V 0.61 0.01
53_R 101_R 0.61 0.01
4_H 26_Y 0.61 0.01
110_D 25_D 0.61 0.01
170_G 45_Q 0.60 0.01
14_K 64_I 0.60 0.01
101_I 102_V 0.60 0.01
224_R 93_Y 0.59 0.01
123_A 121_A 0.59 0.01
99_E 136_A 0.59 0.01
63_V 52_V 0.58 0.01
188_D 106_V 0.58 0.01
115_V 54_M 0.58 0.01
214_Y 129_T 0.58 0.01
214_Y 92_G 0.58 0.01
194_I 78_P 0.58 0.01
113_A 104_F 0.58 0.01
58_N 27_V 0.57 0.01
45_H 132_V 0.57 0.01
82_E 85_K 0.56 0.01
223_V 106_V 0.56 0.01
159_A 118_L 0.56 0.01
155_R 20_A 0.56 0.01
20_V 63_K 0.56 0.01
131_I 37_L 0.56 0.01
31_K 45_Q 0.56 0.01
197_L 37_L 0.56 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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