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OPENSEQ.org
L01 - L13
UniProt: Q5SLP7 - P60488
Length: 369
Sequences: 1657
Seq/Len: 4.51
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CN 2j03CNContact Map
4juw4juxCNContact Map
4btc4btdCNContact Map
3knh3kniCN 3knkCNContact Map
2y102y11CN 2y19CNContact Map
3zn73zn9CN 3zneCNContact Map
2y142y15CN 2y17CNContact Map
3huw3huxCN 3huzCNContact Map
2y0u2y0vCN 2y0xCNContact Map
2xqd2xqeCNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_G 20_G 1.06 0.05
188_D 103_V 0.87 0.03
28_R 137_K 0.77 0.02
79_A 52_V 0.75 0.02
114_V 42_W 0.75 0.02
31_K 30_I 0.73 0.02
166_N 118_K 0.71 0.01
63_V 22_T 0.66 0.01
28_R 7_K 0.65 0.01
63_V 28_T 0.64 0.01
140_N 35_R 0.63 0.01
12_L 118_K 0.62 0.01
6_K 30_I 0.60 0.01
225_I 45_N 0.60 0.01
210_L 61_R 0.59 0.01
58_N 137_K 0.59 0.01
203_E 30_I 0.59 0.01
204_G 93_T 0.59 0.01
28_R 140_V 0.58 0.01
49_G 114_R 0.58 0.01
114_V 109_K 0.57 0.01
226_N 34_L 0.57 0.01
171_A 46_V 0.57 0.01
217_T 2_K 0.57 0.01
137_L 23_L 0.57 0.01
199_A 76_S 0.57 0.01
225_I 131_Q 0.57 0.01
14_K 101_H 0.57 0.01
149_N 137_K 0.56 0.01
199_A 43_T 0.55 0.01
187_A 85_I 0.55 0.01
143_A 122_V 0.55 0.01
74_R 94_H 0.55 0.01
197_L 4_Y 0.55 0.01
8_Y 139_E 0.54 0.01
148_F 6_P 0.54 0.01
9_R 42_W 0.53 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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