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OPENSEQ.org
L01 - S07
UniProt: Q5SLP7 - P17291
Length: 385
Sequences: 1460
Seq/Len: 3.81
I_Prob: 0.14
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00G 2j01C 2j02G 2j03CContact Map
4juw4juwG 4juxCContact Map
3knh3knhG 3kniC 3knjG 3knkCContact Map
2y102y10G 2y11C 2y18G 2y19CContact Map
3zn73zn7G 3zn9C 3zndG 3zneCContact Map
2y142y14G 2y15C 2y16G 2y17CContact Map
3huw3huwG 3huxC 3huyG 3huzCContact Map
2y0u2y0uG 2y0vC 2y0wG 2y0xCContact Map
2xqd2xqdG 2xqeCContact Map
2x9r2x9rG 2x9sC 2x9tG 2x9uCContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_G 16_L 1.18 0.14
227_P 149_R 0.81 0.04
59_V 141_V 0.79 0.04
115_V 149_R 0.78 0.04
103_K 4_R 0.77 0.04
182_P 57_E 0.77 0.04
182_P 49_I 0.76 0.04
176_V 66_V 0.75 0.03
161_R 143_R 0.73 0.03
162_I 130_G 0.73 0.03
113_A 60_K 0.72 0.03
8_Y 118_V 0.71 0.03
192_A 30_I 0.71 0.03
166_N 105_V 0.70 0.03
219_M 83_A 0.70 0.03
35_T 43_F 0.69 0.03
130_R 76_R 0.69 0.03
227_P 58_P 0.68 0.03
225_I 25_A 0.68 0.03
192_A 23_V 0.67 0.02
115_V 106_Q 0.67 0.02
30_V 37_N 0.66 0.02
26_A 104_L 0.66 0.02
17_P 72_R 0.66 0.02
195_R 9_V 0.66 0.02
72_Q 20_D 0.66 0.02
220_G 98_S 0.65 0.02
205_A 92_S 0.65 0.02
148_F 115_R 0.65 0.02
164_F 76_R 0.64 0.02
211_R 106_Q 0.64 0.02
13_E 67_E 0.64 0.02
197_L 129_E 0.63 0.02
105_L 26_F 0.63 0.02
76_L 60_K 0.63 0.02
191_R 30_I 0.63 0.02
54_R 29_K 0.62 0.02
43_E 4_R 0.62 0.02
142_K 90_E 0.62 0.02
161_R 149_R 0.61 0.02
60_R 79_R 0.61 0.02
196_A 31_M 0.61 0.02
58_N 77_S 0.60 0.02
109_M 76_R 0.60 0.02
190_I 13_Q 0.60 0.02
217_T 2_A 0.59 0.02
228_H 53_K 0.59 0.02
99_E 69_V 0.59 0.02
20_V 54_T 0.59 0.02
199_A 17_V 0.59 0.02
205_A 8_E 0.59 0.02
118_P 91_V 0.58 0.02
19_K 66_V 0.58 0.02
227_P 143_R 0.58 0.02
220_G 96_Q 0.58 0.02
20_V 134_A 0.58 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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