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OPENSEQ.org
L11 - L31
UniProt: Q5SLP6 - Q5SJE1
Length: 218
Sequences: 1069
Seq/Len: 5.24
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01K4 2j03K4Contact Map
4juw4juxK4Contact Map
3i8f3i8f4 3i8iL4Contact Map
1nkw1nkwGYContact Map
2x9r2x9sK4 2x9uK4Contact Map
1nwy1nwyGYContact Map
4kfh4kfiK4 4kflK4Contact Map
1sm11sm1GYContact Map
2wh12wh2K4 2wh4K4Contact Map
2avy2aw4IZ 2awbIZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
125_R 31_I 0.94 0.01
56_E 48_R 0.79 0.01
38_V 56_V 0.74 0.01
117_T 60_Q 0.66 0.01
108_A 34_E 0.65 0.01
99_I 61_R 0.64 0.00
105_L 10_V 0.64 0.00
128_A 64_G 0.64 0.00
89_H 34_E 0.61 0.00
136_V 49_F 0.60 0.00
99_I 32_Y 0.60 0.00
71_T 46_Q 0.60 0.00
74_A 62_R 0.60 0.00
12_L 56_V 0.58 0.00
79_R 38_K 0.58 0.00
47_N 62_R 0.58 0.00
56_E 56_V 0.57 0.00
44_A 24_T 0.57 0.00
125_R 60_Q 0.57 0.00
16_K 61_R 0.57 0.00
99_I 62_R 0.57 0.00
69_T 49_F 0.56 0.00
60_Y 17_G 0.56 0.00
40_A 25_Y 0.56 0.00
104_V 57_E 0.55 0.00
4_V 11_P 0.53 0.00
128_A 24_T 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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