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OPENSEQ.org
L11 - S15
UniProt: Q5SLP6 - Q5SJ76
Length: 236
Sequences: 1185
Seq/Len: 5.20
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00O 2j01K 2j02O 2j03KContact Map
4juw4juwO 4juxKContact Map
4kix4kixI 4kiyO 4kizI 4kj0O 4kj1I 4kj2O 4kj3I 4kj4OContact Map
4kj54kj5I 4kj6O 4kj7I 4kj8O 4kj9I 4kjaO 4kjbI 4kjcOContact Map
4gd13r8sI 3r8tI 4gd1O 4gd2OContact Map
3f1e3f1eO 3f1fK 3f1gO 3f1hKContact Map
3i8f3i8gR 3i8hR 3i8iLContact Map
3ofo3ofoO 3ofpO 3ofqI 3ofrIContact Map
2x9r2x9rO 2x9sK 2x9tO 2x9uKContact Map
3i1m3i1mO 3i1nI 3i1oO 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
126_M 43_L 0.71 0.00
78_I 4_T 0.70 0.00
137_E 13_Q 0.68 0.00
71_T 79_R 0.68 0.00
16_K 16_A 0.65 0.00
128_A 38_R 0.64 0.00
63_R 48_K 0.60 0.00
140_G 43_L 0.60 0.00
29_Q 55_G 0.60 0.00
23_V 50_H 0.59 0.00
137_E 60_V 0.58 0.00
44_A 84_K 0.57 0.00
136_V 62_Q 0.57 0.00
122_A 64_R 0.56 0.00
49_G 43_L 0.56 0.00
83_G 71_Q 0.56 0.00
131_A 67_L 0.55 0.00
29_Q 43_L 0.53 0.00
4_V 72_R 0.53 0.00
134_M 46_H 0.53 0.00
96_V 50_H 0.52 0.00
97_G 40_S 0.52 0.00
47_N 89_G 0.51 0.00
97_G 12_I 0.51 0.00
38_V 4_T 0.51 0.00
77_L 55_G 0.50 0.00
87_G 65_R 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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