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OPENSEQ.org
L11 - L15
UniProt: Q5SLP6 - Q5SHQ7
Length: 297
Sequences: 1344
Seq/Len: 4.77
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoILOContact Map
1vq81vq8ILOContact Map
1vqp1vqpILOContact Map
1vqm1vqmILOContact Map
1vql1vqlILOContact Map
1vqk1vqkILOContact Map
1yhq1yhqILOContact Map
1s721s72ILOContact Map
1vq91vq9ILOContact Map
1vqn1vqnILOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
64_S 39_K 0.74 0.00
18_T 56_S 0.67 0.00
38_V 15_R 0.66 0.00
16_K 65_R 0.64 0.00
98_R 90_R 0.64 0.00
18_T 58_T 0.64 0.00
97_G 5_D 0.64 0.00
122_A 141_A 0.63 0.00
14_A 38_Q 0.61 0.00
81_A 29_K 0.61 0.00
75_S 49_R 0.61 0.00
13_P 65_R 0.59 0.00
59_I 116_G 0.57 0.00
119_D 5_D 0.57 0.00
40_A 62_L 0.57 0.00
30_H 137_K 0.57 0.00
85_E 148_L 0.56 0.00
29_Q 64_K 0.56 0.00
64_S 83_V 0.56 0.00
98_R 79_R 0.55 0.00
50_D 5_D 0.54 0.00
10_L 38_Q 0.54 0.00
8_V 137_K 0.54 0.00
84_L 90_R 0.54 0.00
82_A 82_G 0.54 0.00
129_G 64_K 0.53 0.00
122_A 33_R 0.53 0.00
18_T 112_L 0.53 0.00
32_A 112_L 0.52 0.00
133_S 9_N 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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