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OPENSEQ.org
L11 - L14
UniProt: Q5SLP6 - Q5SHP8
Length: 269
Sequences: 1101
Seq/Len: 4.20
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoIKContact Map
1vq81vq8IKContact Map
1vqp1vqpIKContact Map
1vqm1vqmIKContact Map
1vql1vqlIKContact Map
1vqk1vqkIKContact Map
1yhq1yhqIKContact Map
1s721s72IKContact Map
1vq91vq9IKContact Map
1vqn1vqnIKContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
44_A 110_G 0.91 0.01
36_E 92_E 0.86 0.00
77_L 93_P 0.85 0.00
32_A 77_I 0.81 0.00
128_A 75_S 0.76 0.00
47_N 110_G 0.70 0.00
121_E 56_D 0.70 0.00
120_L 28_S 0.69 0.00
30_H 84_A 0.69 0.00
43_A 14_T 0.68 0.00
30_H 21_C 0.67 0.00
32_A 17_R 0.67 0.00
108_A 77_I 0.67 0.00
63_R 19_I 0.67 0.00
6_A 84_A 0.67 0.00
19_P 63_V 0.67 0.00
126_M 40_V 0.67 0.00
38_V 92_E 0.66 0.00
8_V 21_C 0.66 0.00
128_A 56_D 0.64 0.00
23_V 83_A 0.63 0.00
92_G 111_F 0.63 0.00
83_G 41_A 0.62 0.00
76_Y 98_V 0.62 0.00
120_L 62_V 0.62 0.00
129_G 35_V 0.61 0.00
124_A 40_V 0.61 0.00
71_T 22_I 0.60 0.00
121_E 47_I 0.60 0.00
86_K 29_N 0.59 0.00
85_E 29_N 0.59 0.00
53_V 61_V 0.59 0.00
79_R 57_V 0.59 0.00
40_A 110_G 0.59 0.00
133_S 116_S 0.59 0.00
105_L 29_N 0.59 0.00
65_F 39_I 0.59 0.00
104_V 110_G 0.58 0.00
41_F 23_R 0.58 0.00
52_I 112_M 0.58 0.00
69_T 41_A 0.58 0.00
136_V 14_T 0.57 0.00
85_E 91_L 0.57 0.00
47_N 72_P 0.57 0.00
7_V 45_E 0.57 0.00
86_K 110_G 0.57 0.00
18_T 113_K 0.56 0.00
38_V 21_C 0.56 0.00
101_W 62_V 0.56 0.00
130_S 76_A 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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