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OPENSEQ.org
L11 - L23
UniProt: Q5SLP6 - Q5SHP0
Length: 243
Sequences: 1360
Seq/Len: 5.86
I_Prob: 0.14
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoISContact Map
1vq81vq8ISContact Map
1vqp1vqpISContact Map
1vqm1vqmISContact Map
1vql1vqlISContact Map
1vqk1vqkISContact Map
1yhq1yhqISContact Map
1s721s72ISContact Map
1vq91vq9ISContact Map
1vqn1vqnISContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
20_A 26_Y 1.13 0.14
61_A 93_E 0.78 0.04
34_I 13_L 0.71 0.03
76_Y 64_K 0.70 0.03
63_R 88_K 0.69 0.03
2_K 62_K 0.66 0.03
44_A 18_Y 0.64 0.03
79_R 27_T 0.64 0.03
33_N 54_V 0.63 0.02
31_G 16_K 0.62 0.02
51_A 90_E 0.61 0.02
98_R 59_V 0.61 0.02
100_T 13_L 0.61 0.02
116_N 6_D 0.60 0.02
75_S 41_N 0.60 0.02
11_Q 2_K 0.59 0.02
136_V 74_P 0.59 0.02
127_I 9_L 0.59 0.02
89_H 65_R 0.58 0.02
30_H 72_K 0.58 0.02
79_R 25_K 0.57 0.02
105_L 85_P 0.56 0.02
13_P 14_S 0.56 0.02
56_E 87_Q 0.56 0.02
38_V 9_L 0.56 0.02
82_A 46_A 0.56 0.02
101_W 8_I 0.55 0.02
130_S 92_L 0.55 0.02
63_R 46_A 0.55 0.02
51_A 14_S 0.55 0.02
16_K 93_E 0.54 0.02
136_V 58_H 0.54 0.02
127_I 33_K 0.54 0.02
108_A 11_P 0.53 0.01
82_A 40_K 0.53 0.01
12_L 3_T 0.53 0.01
138_V 19_A 0.52 0.01
33_N 56_T 0.52 0.01
136_V 17_A 0.51 0.01
104_V 88_K 0.51 0.01
134_M 85_P 0.51 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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