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OPENSEQ.org
L11 - S10
UniProt: Q5SLP6 - Q5SHN7
Length: 252
Sequences: 1027
Seq/Len: 4.28
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00J 2j01K 2j02J 2j03KContact Map
4juw4juwJ 4juxKContact Map
4kix4kixI 4kiyJ 4kizI 4kj0J 4kj1I 4kj2J 4kj3I 4kj4JContact Map
4kj54kj5I 4kj6J 4kj7I 4kj8J 4kj9I 4kjaJ 4kjbI 4kjcJContact Map
4gd13r8sI 3r8tI 4gd1J 4gd2JContact Map
3f1e3f1eJ 3f1fK 3f1gJ 3f1hKContact Map
3i8f3i8gM 3i8hM 3i8iLContact Map
3ofo3ofoJ 3ofpJ 3ofqI 3ofrIContact Map
2x9r2x9rJ 2x9sK 2x9tJ 2x9uKContact Map
3i1m3i1mJ 3i1nI 3i1oJ 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
80_K 38_I 1.03 0.03
75_S 11_F 0.99 0.03
126_M 48_T 0.93 0.02
43_A 6_I 0.92 0.02
128_A 27_A 0.81 0.01
49_G 3_K 0.80 0.01
16_K 50_I 0.75 0.01
139_V 16_L 0.73 0.01
75_S 50_I 0.72 0.01
41_F 38_I 0.69 0.01
46_A 87_T 0.68 0.01
126_M 3_K 0.67 0.01
117_T 77_P 0.67 0.01
41_F 28_R 0.67 0.01
127_I 71_L 0.67 0.01
90_K 61_E 0.67 0.01
138_V 52_G 0.67 0.01
7_V 45_R 0.66 0.01
44_A 73_D 0.66 0.01
85_E 27_A 0.65 0.01
69_T 35_S 0.65 0.01
116_N 3_K 0.65 0.01
139_V 56_H 0.64 0.01
104_V 43_R 0.64 0.01
27_L 85_L 0.63 0.01
2_K 87_T 0.63 0.01
139_V 79_R 0.63 0.01
15_G 86_M 0.62 0.01
86_K 72_V 0.61 0.01
63_R 57_K 0.61 0.01
29_Q 14_K 0.61 0.01
30_H 92_T 0.61 0.01
61_A 79_R 0.60 0.01
99_I 45_R 0.60 0.01
16_K 3_K 0.60 0.01
8_V 61_E 0.60 0.01
41_F 35_S 0.59 0.01
92_G 16_L 0.59 0.01
92_G 80_K 0.59 0.01
140_G 13_H 0.59 0.01
4_V 32_A 0.59 0.01
35_M 97_E 0.59 0.01
94_E 46_R 0.59 0.01
121_E 9_R 0.59 0.01
126_M 35_S 0.58 0.01
83_G 86_M 0.58 0.01
35_M 7_K 0.58 0.01
12_L 9_R 0.58 0.01
41_F 48_T 0.57 0.01
32_A 53_P 0.57 0.01
46_A 46_R 0.57 0.01
84_L 50_I 0.57 0.01
29_Q 10_G 0.57 0.01
59_I 69_N 0.57 0.01
134_M 52_G 0.57 0.01
113_P 53_P 0.57 0.01
23_V 51_R 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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