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OPENSEQ.org
L11 - S09
UniProt: Q5SLP6 - P80374
Length: 275
Sequences: 1337
Seq/Len: 5.03
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00I 2j01K 2j02I 2j03KContact Map
4juw4juwI 4juxKContact Map
4kix4kixI 4kiyI 4kizI 4kj0I 4kj1I 4kj2I 4kj3I 4kj4IContact Map
4kj54kj5I 4kj6I 4kj7I 4kj8I 4kj9I 4kjaI 4kjbI 4kjcIContact Map
4gd13r8sI 3r8tI 4gd1I 4gd2IContact Map
3f1e3f1eI 3f1fK 3f1gI 3f1hKContact Map
3i8f3i8gL 3i8hL 3i8iLContact Map
3ofo3ofoI 3ofpI 3ofqI 3ofrIContact Map
2x9r2x9rI 2x9sK 2x9tI 2x9uKContact Map
3i1m3i1mI 3i1nI 3i1oI 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_G 44_V 0.99 0.02
20_A 44_V 0.87 0.01
46_A 20_R 0.79 0.01
83_G 54_D 0.74 0.01
138_V 60_D 0.73 0.01
85_E 30_G 0.68 0.01
44_A 27_T 0.66 0.01
110_Q 9_R 0.66 0.01
80_K 68_G 0.66 0.01
126_M 108_V 0.66 0.01
84_L 34_N 0.65 0.01
41_F 125_Y 0.65 0.01
18_T 62_Y 0.64 0.01
93_R 41_V 0.64 0.01
77_L 50_L 0.64 0.01
52_I 118_K 0.64 0.01
8_V 57_G 0.61 0.01
127_I 27_T 0.61 0.01
51_A 41_V 0.61 0.01
30_H 101_F 0.60 0.01
16_K 43_A 0.60 0.01
87_G 106_A 0.59 0.01
131_A 85_L 0.59 0.01
104_V 77_I 0.58 0.01
86_K 28_V 0.57 0.01
92_G 89_N 0.57 0.01
63_R 123_P 0.57 0.01
107_I 102_L 0.57 0.01
30_H 109_V 0.56 0.01
85_E 125_Y 0.56 0.01
63_R 125_Y 0.56 0.01
91_P 28_V 0.55 0.01
79_R 28_V 0.55 0.01
120_L 94_A 0.55 0.01
61_A 114_Y 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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