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OPENSEQ.org
L11 - S04
UniProt: Q5SLP6 - P80373
Length: 356
Sequences: 1114
Seq/Len: 3.21
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00D 2j01K 2j02D 2j03KContact Map
4juw4juwD 4juxKContact Map
4kix4kixI 4kiyD 4kizI 4kj0D 4kj1I 4kj2D 4kj3I 4kj4DContact Map
4kj54kj5I 4kj6D 4kj7I 4kj8D 4kj9I 4kjaD 4kjbI 4kjcDContact Map
4gd13r8sI 3r8tI 4gd1D 4gd2DContact Map
3f1e3f1eD 3f1fK 3f1gD 3f1hKContact Map
3i8f3i8gG 3i8hG 3i8iLContact Map
3ofo3ofoD 3ofpD 3ofqI 3ofrIContact Map
2x9r2x9rD 2x9sK 2x9tD 2x9uKContact Map
3i1m3i1mD 3i1nI 3i1oD 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
116_N 125_H 0.82 0.00
23_V 104_V 0.77 0.00
53_V 15_E 0.75 0.00
123_A 143_G 0.75 0.00
40_A 161_N 0.73 0.00
112_M 177_D 0.72 0.00
18_T 190_D 0.70 0.00
38_V 86_K 0.70 0.00
69_T 156_E 0.68 0.00
80_K 199_N 0.65 0.00
119_D 203_V 0.64 0.00
90_K 49_R 0.63 0.00
93_R 153_R 0.62 0.00
103_Q 209_R 0.62 0.00
12_L 19_L 0.61 0.00
56_E 209_R 0.61 0.00
113_P 139_R 0.61 0.00
90_K 136_P 0.61 0.00
79_R 55_A 0.61 0.00
23_V 64_L 0.61 0.00
122_A 138_Y 0.60 0.00
43_A 161_N 0.60 0.00
89_H 182_K 0.60 0.00
61_A 6_G 0.59 0.00
99_I 85_K 0.59 0.00
120_L 121_V 0.59 0.00
100_T 148_V 0.59 0.00
58_T 104_V 0.58 0.00
40_A 49_R 0.58 0.00
44_A 53_D 0.58 0.00
41_F 65_R 0.58 0.00
75_S 203_V 0.57 0.00
7_V 180_G 0.57 0.00
102_E 105_V 0.57 0.00
138_V 202_L 0.56 0.00
85_E 184_K 0.56 0.00
43_A 97_L 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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