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OPENSEQ.org
L11 - L34
UniProt: Q5SLP6 - P80340
Length: 196
Sequences: 798
Seq/Len: 4.34
I_Prob: 0.07
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01K7 2j03K7Contact Map
4juw4juxK7Contact Map
4kix4kixI2 4kizI2 4kj1I2 4kj3I2Contact Map
4kj54kj5I2 4kj7I2 4kj9I2 4kjbI2Contact Map
2zjr2zjrF2Contact Map
4gd13r8sI2 3r8tI2Contact Map
3f1e3f1fK7 3f1hK7Contact Map
3i8f3i8f7 3i8iL7Contact Map
1nkw1nkwG2Contact Map
3ofo3ofqI2 3ofrI2Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
20_A 8_N 1.09 0.07
50_D 3_R 0.86 0.03
18_T 11_K 0.78 0.02
64_S 36_Q 0.76 0.02
6_A 11_K 0.70 0.02
52_I 10_R 0.70 0.02
14_A 44_P 0.69 0.02
31_G 28_R 0.66 0.01
63_R 8_N 0.65 0.01
126_M 15_T 0.65 0.01
56_E 8_N 0.61 0.01
127_I 43_T 0.60 0.01
16_K 30_V 0.60 0.01
11_Q 7_P 0.60 0.01
112_M 9_R 0.59 0.01
90_K 43_T 0.59 0.01
69_T 1_M 0.59 0.01
128_A 19_R 0.59 0.01
66_T 3_R 0.59 0.01
6_A 14_K 0.58 0.01
20_A 10_R 0.57 0.01
138_V 2_K 0.55 0.01
130_S 11_K 0.54 0.01
83_G 25_P 0.54 0.01
136_V 10_R 0.54 0.01
109_K 44_P 0.54 0.01
75_S 15_T 0.53 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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