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OPENSEQ.org
L11 - L20
UniProt: Q5SLP6 - P60491
Length: 265
Sequences: 1075
Seq/Len: 4.20
I_Prob: 0.43
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01KU 2j03KUContact Map
4juw4juxKUContact Map
4kix4kixIQ 4kizIQ 4kj1IQ 4kj3IQContact Map
4kj54kj5IQ 4kj7IQ 4kj9IQ 4kjbIQContact Map
2zjr2zjrFNContact Map
4gd13r8sIQ 3r8tIQContact Map
3f1e3f1fKU 3f1hKUContact Map
3i8f3i8f1 3i8iL1Contact Map
1nkw1nkwGOContact Map
3ofo3ofqIQ 3ofrIQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_L 42_A 1.29 0.43
40_A 91_D 0.81 0.10
93_R 103_P 0.77 0.08
71_T 24_Y 0.76 0.08
136_V 41_A 0.74 0.07
47_N 91_D 0.73 0.07
97_G 105_V 0.69 0.06
130_S 9_V 0.68 0.06
86_K 37_E 0.67 0.05
60_Y 116_A 0.67 0.05
61_A 38_T 0.67 0.05
136_V 78_T 0.67 0.05
130_S 14_H 0.65 0.05
6_A 53_R 0.64 0.05
86_K 59_R 0.63 0.04
56_E 38_T 0.63 0.04
61_A 25_W 0.63 0.04
52_I 14_H 0.62 0.04
46_A 69_C 0.62 0.04
87_G 56_D 0.58 0.04
30_H 53_R 0.58 0.03
30_H 33_R 0.57 0.03
41_F 12_R 0.56 0.03
138_V 114_K 0.56 0.03
120_L 12_R 0.56 0.03
126_M 91_D 0.55 0.03
89_H 51_K 0.55 0.03
77_L 102_E 0.55 0.03
128_A 36_R 0.55 0.03
63_R 113_A 0.54 0.03
116_N 103_P 0.54 0.03
63_R 25_W 0.54 0.03
68_V 115_A 0.54 0.03
32_A 7_G 0.54 0.03
78_I 59_R 0.54 0.03
112_M 87_G 0.53 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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