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OPENSEQ.org
L11 - L13
UniProt: Q5SLP6 - P60488
Length: 287
Sequences: 1468
Seq/Len: 5.26
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoIJContact Map
1vq81vq8IJContact Map
1vqp1vqpIJContact Map
1vqm1vqmIJContact Map
1vql1vqlIJContact Map
1vqk1vqkIJContact Map
1yhq1yhqIJContact Map
1s721s72IJContact Map
1vq91vq9IJContact Map
1vqn1vqnIJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_G 33_L 0.70 0.00
127_I 54_V 0.70 0.00
92_G 105_G 0.69 0.00
50_D 45_N 0.65 0.00
11_Q 78_Y 0.64 0.00
136_V 6_P 0.63 0.00
83_G 7_K 0.62 0.00
69_T 79_P 0.61 0.00
125_R 129_P 0.60 0.00
113_P 139_E 0.59 0.00
120_L 41_D 0.57 0.00
86_K 91_L 0.57 0.00
63_R 14_V 0.56 0.00
99_I 84_K 0.56 0.00
84_L 7_K 0.55 0.00
12_L 39_R 0.55 0.00
16_K 136_E 0.55 0.00
138_V 7_K 0.55 0.00
12_L 116_L 0.54 0.00
138_V 93_T 0.53 0.00
63_R 119_R 0.53 0.00
46_A 2_K 0.53 0.00
41_F 78_Y 0.53 0.00
95_K 103_V 0.52 0.00
13_P 8_Q 0.52 0.00
52_I 101_H 0.52 0.00
44_A 5_V 0.52 0.00
102_E 6_P 0.52 0.00
14_A 80_G 0.51 0.00
84_L 3_T 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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