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OPENSEQ.org
L35 - S06
UniProt: Q5SKU1 - Q5SLP8
Length: 166
Sequences: 1138
Seq/Len: 6.98
I_Prob: 0.17
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2d8 3v2eF 3v2f8Contact Map
2j002j00F 2j018 2j02F 2j038Contact Map
4juw4juwF 4jux8Contact Map
4kix4kix3 4kiyF 4kiz3 4kj0F 4kj13 4kj2F 4kj33 4kj4FContact Map
4kj54kj53 4kj6F 4kj73 4kj8F 4kj93 4kjaF 4kjb3 4kjcFContact Map
3uyd3uydI 3uye8 3uyfI 3uyg8Contact Map
4gd13r8s3 3r8t3 4gd1F 4gd2FContact Map
3knh3knhF 3kni8 3knjF 3knk8Contact Map
3ohc3ohcF 3ohdF 3ohj8 3ohk8Contact Map
3f1e3f1eF 3f1f8 3f1gF 3f1h8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
64_Y 62_W 1.14 0.17
30_R 93_S 1.05 0.13
15_K 56_P 0.97 0.10
60_L 46_R 0.90 0.08
41_I 6_V 0.85 0.07
6_T 62_W 0.84 0.06
43_Q 46_R 0.78 0.05
60_L 36_R 0.77 0.05
34_W 79_L 0.74 0.04
53_P 82_R 0.72 0.04
38_G 94_Q 0.70 0.04
22_V 15_D 0.69 0.04
8_K 35_A 0.69 0.03
57_R 24_E 0.68 0.03
40_E 8_I 0.68 0.03
33_N 25_I 0.68 0.03
59_K 33_Y 0.67 0.03
10_A 65_V 0.66 0.03
27_T 26_I 0.66 0.03
58_I 54_K 0.65 0.03
50_L 17_S 0.65 0.03
22_V 56_P 0.63 0.03
21_K 56_P 0.63 0.03
33_N 48_L 0.62 0.03
32_L 2_R 0.61 0.03
41_I 61_L 0.61 0.03
32_L 45_L 0.61 0.02
56_E 99_A 0.59 0.02
9_G 74_D 0.59 0.02
10_A 20_A 0.59 0.02
6_T 65_V 0.59 0.02
11_K 45_L 0.59 0.02
37_S 58_G 0.58 0.02
10_A 66_E 0.58 0.02
53_P 31_E 0.58 0.02
63_P 46_R 0.58 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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