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OPENSEQ.org
L35 - S17
UniProt: Q5SKU1 - Q5SHP7
Length: 170
Sequences: 1093
Seq/Len: 7.49
I_Prob: 0.44
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2d8 3v2eQ 3v2f8Contact Map
2j002j00Q 2j018 2j02Q 2j038Contact Map
4juw4juwQ 4jux8Contact Map
4kix4kix3 4kiyQ 4kiz3 4kj0Q 4kj13 4kj2Q 4kj33 4kj4QContact Map
4kj54kj53 4kj6Q 4kj73 4kj8Q 4kj93 4kjaQ 4kjb3 4kjcQContact Map
3uyd3uydT 3uye8 3uyfT 3uyg8Contact Map
4gd13r8s3 3r8t3 4gd1Q 4gd2QContact Map
3knh3knhQ 3kni8 3knjQ 3knk8Contact Map
3ohc3ohcQ 3ohdQ 3ohj8 3ohk8Contact Map
3ohy3ohyQ 3ohz8 3oi0Q 3oi18Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
44_K 15_M 1.26 0.44
33_N 67_K 0.79 0.11
57_R 42_Y 0.76 0.10
11_K 70_R 0.74 0.09
34_W 41_K 0.67 0.06
7_H 37_K 0.67 0.06
63_P 3_K 0.66 0.06
11_K 28_P 0.64 0.06
38_G 9_V 0.62 0.05
44_K 14_K 0.61 0.05
8_K 25_R 0.61 0.05
48_F 67_K 0.60 0.05
37_S 10_V 0.60 0.04
42_R 23_V 0.59 0.04
10_A 19_V 0.58 0.04
62_L 36_I 0.58 0.04
14_V 33_G 0.58 0.04
40_E 67_K 0.57 0.04
8_K 81_R 0.57 0.04
52_K 48_E 0.57 0.04
4_M 11_V 0.57 0.04
25_M 18_T 0.57 0.04
54_E 26_Q 0.55 0.04
45_G 49_E 0.55 0.03
29_K 18_T 0.54 0.03
3_K 32_Y 0.54 0.03
18_A 44_A 0.53 0.03
25_M 20_T 0.52 0.03
9_G 15_M 0.52 0.03
7_H 34_K 0.51 0.03
18_A 20_T 0.51 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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