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OPENSEQ.org
L35 - S19
UniProt: Q5SKU1 - Q5SHP2
Length: 158
Sequences: 928
Seq/Len: 6.03
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cS 3v2d8 3v2eS 3v2f8Contact Map
2j002j00S 2j018 2j02S 2j038Contact Map
4juw4juwS 4jux8Contact Map
4kix4kix3 4kiyS 4kiz3 4kj0S 4kj13 4kj2S 4kj33 4kj4SContact Map
4kj54kj53 4kj6S 4kj73 4kj8S 4kj93 4kjaS 4kjb3 4kjcSContact Map
3uyd3uydV 3uye8 3uyfV 3uyg8Contact Map
4gd13r8s3 3r8t3 4gd1S 4gd2SContact Map
3ohc3ohcS 3ohdS 3ohj8 3ohk8Contact Map
3knh3knhS 3kni8 3knjS 3knk8Contact Map
3ohy3ohyS 3ohz8 3oi0S 3oi18Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_V 66_M 0.92 0.01
28_G 41_V 0.92 0.01
19_S 76_P 0.88 0.01
26_K 30_L 0.81 0.01
34_W 64_E 0.79 0.01
9_G 14_H 0.78 0.01
15_K 37_R 0.78 0.01
46_R 75_A 0.76 0.01
45_G 29_R 0.75 0.01
9_G 40_I 0.74 0.01
38_G 44_M 0.74 0.01
7_H 39_T 0.73 0.01
59_K 45_V 0.72 0.01
40_E 45_V 0.72 0.01
7_H 44_M 0.71 0.01
14_V 52_Y 0.71 0.01
60_L 85_K 0.70 0.01
39_K 60_V 0.69 0.01
45_G 65_N 0.68 0.01
17_T 45_V 0.66 0.00
38_G 62_I 0.66 0.00
51_A 62_I 0.65 0.00
47_K 41_V 0.65 0.00
45_G 11_V 0.64 0.00
36_K 10_F 0.64 0.00
10_A 59_P 0.62 0.00
35_Q 22_L 0.62 0.00
30_R 67_V 0.62 0.00
25_M 81_R 0.61 0.00
62_L 89_A 0.61 0.00
9_G 75_A 0.61 0.00
46_R 61_Y 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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