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OPENSEQ.org
L31 - S08
UniProt: Q5SJE1 - Q5SHQ2
Length: 209
Sequences: 1155
Seq/Len: 5.95
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2d4 3v2eH 3v2f4Contact Map
2j002j00H 2j014 2j02H 2j034Contact Map
4juw4juwH 4jux4Contact Map
3uyd3uydK 3uye4 3uyfK 3uyg4Contact Map
3knh3knhH 3kni4 3knjH 3knk4Contact Map
3ohc3ohcH 3ohdH 3ohj4 3ohk4Contact Map
3f1e3f1eH 3f1f4 3f1gH 3f1h4Contact Map
3ohy3ohyH 3ohz4 3oi0H 3oi14Contact Map
3v223v22H 3v234 3v24H 3v254Contact Map
3uz63uz6K 3uz7K 3uz84 3uz94Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
62_R 13_I 0.95 0.01
49_F 97_V 0.91 0.01
43_Y 120_T 0.88 0.01
52_T 135_C 0.87 0.01
63_Y 10_L 0.84 0.01
57_E 88_K 0.84 0.01
58_R 62_Y 0.83 0.01
48_R 20_Y 0.83 0.01
30_E 61_V 0.75 0.01
32_Y 60_R 0.73 0.01
48_R 120_T 0.72 0.01
63_Y 62_Y 0.70 0.01
62_R 79_V 0.70 0.01
53_E 105_R 0.69 0.01
65_D 9_M 0.66 0.01
44_T 85_R 0.66 0.01
32_Y 133_L 0.65 0.01
19_G 38_I 0.65 0.01
55_R 115_S 0.64 0.01
12_A 48_Y 0.63 0.01
33_V 31_F 0.62 0.01
61_R 80_I 0.61 0.01
50_V 102_R 0.60 0.01
34_E 124_A 0.60 0.01
20_N 112_L 0.60 0.01
58_R 20_Y 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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