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OPENSEQ.org
L31 - S14
UniProt: Q5SJE1 - Q5SHQ1
Length: 132
Sequences: 1123
Seq/Len: 8.91
I_Prob: 0.58
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2d4 3v2eN 3v2f4Contact Map
2j002j00N 2j014 2j02N 2j034Contact Map
4juw4juwN 4jux4Contact Map
3uyd3uydQ 3uye4 3uyfQ 3uyg4Contact Map
3knh3knhN 3kni4 3knjN 3knk4Contact Map
3ohc3ohcN 3ohdN 3ohj4 3ohk4Contact Map
3f1e3f1eN 3f1f4 3f1gN 3f1h4Contact Map
3ohy3ohyN 3ohz4 3oi0N 3oi14Contact Map
3v223v22N 3v234 3v24N 3v254Contact Map
3uz63uz6Q 3uz7Q 3uz84 3uz94Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
48_R 52_Q 1.31 0.58
37_S 49_H 0.88 0.19
22_I 32_S 0.75 0.12
5_I 57_R 0.70 0.09
58_R 35_R 0.67 0.08
65_D 13_T 0.66 0.08
14_I 32_S 0.66 0.08
53_E 49_H 0.66 0.08
5_I 50_K 0.64 0.07
55_R 38_G 0.64 0.07
46_Q 18_V 0.64 0.07
28_K 47_L 0.63 0.07
53_E 31_R 0.60 0.06
56_V 19_R 0.59 0.06
58_R 40_C 0.58 0.05
34_E 36_F 0.57 0.05
1_M 42_I 0.56 0.05
33_V 49_H 0.55 0.04
56_V 3_R 0.55 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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