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OPENSEQ.org
L31 - S17
UniProt: Q5SJE1 - Q5SHP7
Length: 176
Sequences: 1199
Seq/Len: 8.16
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2d4 3v2eQ 3v2f4Contact Map
2j002j00Q 2j014 2j02Q 2j034Contact Map
4juw4juwQ 4jux4Contact Map
3uyd3uydT 3uye4 3uyfT 3uyg4Contact Map
3ohc3ohcQ 3ohdQ 3ohj4 3ohk4Contact Map
3knh3knhQ 3kni4 3knjQ 3knk4Contact Map
3f1e3f1eQ 3f1f4 3f1gQ 3f1h4Contact Map
3ohy3ohyQ 3ohz4 3oi0Q 3oi14Contact Map
3v223v22Q 3v234 3v24Q 3v254Contact Map
3uz63uz6T 3uz7T 3uz84 3uz94Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
34_E 41_K 1.01 0.04
14_I 18_T 0.86 0.02
3_E 9_V 0.78 0.02
3_E 40_K 0.75 0.02
63_Y 54_G 0.69 0.01
31_I 25_R 0.67 0.01
48_R 36_I 0.67 0.01
9_L 25_R 0.67 0.01
50_V 30_P 0.64 0.01
33_V 31_L 0.64 0.01
63_Y 68_R 0.63 0.01
43_Y 68_R 0.62 0.01
57_E 32_Y 0.62 0.01
23_E 36_I 0.62 0.01
42_F 44_A 0.61 0.01
66_S 67_K 0.60 0.01
5_I 51_Y 0.59 0.01
52_T 51_Y 0.58 0.01
49_F 35_V 0.58 0.01
62_R 25_R 0.58 0.01
37_S 18_T 0.58 0.01
62_R 40_K 0.58 0.01
46_Q 35_V 0.57 0.01
21_V 57_V 0.57 0.01
66_S 23_V 0.56 0.01
8_K 57_V 0.56 0.01
61_R 36_I 0.55 0.01
35_V 16_Q 0.55 0.01
60_Q 37_K 0.55 0.01
35_V 20_T 0.55 0.01
11_P 50_K 0.55 0.01
53_E 5_V 0.54 0.01
12_A 43_L 0.54 0.01
31_I 43_L 0.54 0.01
48_R 23_V 0.54 0.01
20_N 30_P 0.54 0.01
8_K 30_P 0.54 0.01
55_R 36_I 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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