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OPENSEQ.org
L31 - L34
UniProt: Q5SJE1 - P80340
Length: 120
Sequences: 950
Seq/Len: 8.64
I_Prob: 0.14
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d47 3v2f47Contact Map
2j002j0147 2j0347Contact Map
4juw4jux47Contact Map
4btc4btd47Contact Map
3uyd3uye47 3uyg47Contact Map
3v223v2347 3v2547Contact Map
3uz63uz847 3uz947Contact Map
3ohc3ohj47 3ohk47Contact Map
3knh3kni47 3knk47Contact Map
3ohy3ohz47 3oi147Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_A 8_N 1.11 0.14
56_V 19_R 0.93 0.08
46_Q 12_R 0.85 0.06
42_F 2_K 0.82 0.05
63_Y 9_R 0.80 0.05
65_D 14_K 0.76 0.04
35_V 29_K 0.72 0.04
53_E 15_T 0.71 0.03
27_T 33_R 0.70 0.03
46_Q 14_K 0.70 0.03
62_R 28_R 0.69 0.03
58_R 44_P 0.68 0.03
9_L 31_L 0.68 0.03
3_E 1_M 0.67 0.03
55_R 25_P 0.67 0.03
51_D 38_G 0.67 0.03
5_I 9_R 0.65 0.03
24_T 26_G 0.65 0.03
57_E 32_K 0.64 0.03
50_V 43_T 0.63 0.02
17_G 30_V 0.63 0.02
61_R 10_R 0.63 0.02
1_M 7_P 0.63 0.02
14_I 9_R 0.62 0.02
62_R 24_T 0.62 0.02
21_V 41_R 0.61 0.02
48_R 9_R 0.61 0.02
4_G 42_L 0.61 0.02
51_D 12_R 0.60 0.02
32_Y 31_L 0.59 0.02
11_P 23_R 0.59 0.02
20_N 36_Q 0.58 0.02
32_Y 5_W 0.58 0.02
55_R 11_K 0.57 0.02
48_R 22_M 0.57 0.02
53_E 10_R 0.57 0.02
20_N 23_R 0.57 0.02
66_S 31_L 0.57 0.02
30_E 1_M 0.57 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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