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OPENSEQ.org
L25 - S18
UniProt: Q5SHZ1 - Q5SLQ0
Length: 294
Sequences: 1198
Seq/Len: 4.70
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dZ 3v2eR 3v2fZContact Map
2j002j00R 2j01Z 2j02R 2j03ZContact Map
4juw4juwR 4juxZContact Map
4kix4kixV 4kiyR 4kizV 4kj0R 4kj1V 4kj2R 4kj3V 4kj4RContact Map
4kj54kj5V 4kj6R 4kj7V 4kj8R 4kj9V 4kjaR 4kjbV 4kjcRContact Map
3uyd3uydU 3uyeV 3uyfU 3uygVContact Map
4gd13r8sV 3r8tV 4gd1R 4gd2RContact Map
3knh3knhR 3kniZ 3knjR 3knkZContact Map
3ohc3ohcR 3ohdR 3ohjZ 3ohkZContact Map
3f1e3f1eR 3f1fZ 3f1gR 3f1hZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
124_I 37_V 0.90 0.01
147_G 72_R 0.81 0.00
8_Y 70_I 0.80 0.00
30_N 69_T 0.80 0.00
14_K 56_T 0.80 0.00
71_V 57_G 0.77 0.00
40_D 81_F 0.76 0.00
79_R 45_S 0.76 0.00
166_S 44_L 0.74 0.00
104_F 46_E 0.72 0.00
54_H 47_T 0.72 0.00
171_I 84_K 0.70 0.00
73_Q 82_T 0.70 0.00
170_T 77_G 0.69 0.00
125_L 79_L 0.67 0.00
36_K 70_I 0.67 0.00
144_L 84_K 0.67 0.00
67_L 59_S 0.66 0.00
174_V 73_A 0.66 0.00
37_V 77_G 0.65 0.00
166_S 47_T 0.65 0.00
138_E 21_K 0.64 0.00
104_F 73_A 0.64 0.00
100_V 76_L 0.64 0.00
72_R 55_R 0.63 0.00
54_H 76_L 0.63 0.00
38_Y 81_F 0.62 0.00
3_Y 43_F 0.62 0.00
90_V 51_L 0.62 0.00
172_A 43_F 0.62 0.00
79_R 55_R 0.61 0.00
84_E 70_I 0.61 0.00
139_V 31_L 0.61 0.00
26_G 48_G 0.61 0.00
26_G 26_L 0.60 0.00
34_N 69_T 0.60 0.00
122_R 82_T 0.59 0.00
44_F 21_K 0.59 0.00
53_I 53_R 0.59 0.00
154_D 50_I 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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