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OPENSEQ.org
L25 - S06
UniProt: Q5SHZ1 - Q5SLP8
Length: 307
Sequences: 1185
Seq/Len: 4.19
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2dZ 3v2eF 3v2fZContact Map
2j002j00F 2j01Z 2j02F 2j03ZContact Map
4juw4juwF 4juxZContact Map
4kix4kixV 4kiyF 4kizV 4kj0F 4kj1V 4kj2F 4kj3V 4kj4FContact Map
4kj54kj5V 4kj6F 4kj7V 4kj8F 4kj9V 4kjaF 4kjbV 4kjcFContact Map
3uyd3uydI 3uyeV 3uyfI 3uygVContact Map
4gd13r8sV 3r8tV 4gd1F 4gd2FContact Map
3ohc3ohcF 3ohdF 3ohjZ 3ohkZContact Map
3knh3knhF 3kniZ 3knjF 3knkZContact Map
3ohy3ohyF 3ohzZ 3oi0F 3oi1ZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
100_V 89_M 1.09 0.06
156_K 36_R 0.96 0.04
20_R 86_R 0.85 0.03
159_P 36_R 0.83 0.03
64_G 73_N 0.83 0.03
22_G 85_V 0.82 0.03
123_D 73_N 0.81 0.03
27_V 92_K 0.80 0.03
75_N 60_F 0.79 0.02
37_V 91_V 0.77 0.02
176_P 67_M 0.76 0.02
123_D 85_V 0.76 0.02
32_H 83_D 0.75 0.02
174_V 67_M 0.75 0.02
45_D 89_M 0.75 0.02
26_G 83_D 0.75 0.02
139_V 21_L 0.74 0.02
72_R 88_V 0.74 0.02
38_Y 67_M 0.72 0.02
45_D 30_L 0.71 0.02
70_L 32_N 0.71 0.02
39_V 98_L 0.71 0.02
80_R 38_E 0.71 0.02
124_I 63_Y 0.70 0.02
64_G 37_V 0.70 0.02
141_V 29_A 0.70 0.02
161_V 61_L 0.69 0.02
91_L 12_P 0.69 0.02
91_L 64_Q 0.69 0.02
163_L 28_R 0.68 0.02
21_A 32_N 0.68 0.02
17_A 2_R 0.67 0.01
83_P 10_L 0.67 0.01
141_V 86_R 0.67 0.01
95_P 73_N 0.67 0.01
92_S 86_R 0.66 0.01
146_I 18_Q 0.66 0.01
21_A 72_V 0.66 0.01
28_M 10_L 0.65 0.01
154_D 54_K 0.65 0.01
89_F 47_R 0.65 0.01
36_K 48_L 0.65 0.01
44_F 64_Q 0.64 0.01
183_L 74_D 0.64 0.01
170_T 7_N 0.64 0.01
86_V 48_L 0.64 0.01
35_R 53_A 0.64 0.01
139_V 66_E 0.63 0.01
80_R 29_A 0.63 0.01
169_E 91_V 0.63 0.01
102_L 21_L 0.62 0.01
106_G 12_P 0.62 0.01
60_E 31_E 0.62 0.01
110_G 27_Q 0.62 0.01
15_P 52_I 0.62 0.01
90_V 35_A 0.62 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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