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OPENSEQ.org
L25 - S13
UniProt: Q5SHZ1 - P80377
Length: 332
Sequences: 1196
Seq/Len: 3.90
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2dZ 3v2eM 3v2fZContact Map
2j002j00M 2j01Z 2j02M 2j03ZContact Map
4juw4juwM 4juxZContact Map
4kix4kixV 4kiyM 4kizV 4kj0M 4kj1V 4kj2M 4kj3V 4kj4MContact Map
4kj54kj5V 4kj6M 4kj7V 4kj8M 4kj9V 4kjaM 4kjbV 4kjcMContact Map
3uyd3uydP 3uyeV 3uyfP 3uygVContact Map
4gd13r8sV 3r8tV 4gd1M 4gd2MContact Map
3ohc3ohcM 3ohdM 3ohjZ 3ohkZContact Map
3knh3knhM 3kniZ 3knjM 3knkZContact Map
3ohy3ohyM 3ohzZ 3oi0M 3oi1ZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_V 102_R 0.97 0.01
152_A 51_A 0.94 0.01
12_G 83_D 0.86 0.01
155_L 65_K 0.86 0.01
87_D 73_E 0.85 0.01
128_V 73_E 0.84 0.01
12_G 76_A 0.83 0.01
75_N 45_V 0.83 0.01
114_G 18_A 0.82 0.01
130_P 73_E 0.81 0.01
74_V 30_A 0.81 0.01
117_L 56_L 0.80 0.01
9_Y 64_W 0.78 0.01
148_D 36_K 0.78 0.01
44_F 20_T 0.76 0.01
95_P 60_V 0.76 0.01
91_L 75_A 0.75 0.01
17_A 14_R 0.75 0.01
80_R 51_A 0.75 0.01
164_A 35_E 0.74 0.01
110_G 117_V 0.74 0.01
34_N 76_A 0.73 0.01
168_E 56_L 0.73 0.01
139_V 28_A 0.73 0.01
109_A 50_E 0.72 0.01
46_K 7_V 0.72 0.01
171_I 43_T 0.71 0.01
4_R 30_A 0.71 0.01
20_R 105_T 0.70 0.01
48_F 30_A 0.70 0.01
130_P 114_R 0.69 0.01
115_G 23_Y 0.69 0.01
75_N 64_W 0.69 0.01
116_V 44_R 0.68 0.01
157_L 102_R 0.68 0.00
169_E 49_T 0.68 0.00
38_Y 16_D 0.67 0.00
83_P 47_D 0.67 0.00
134_P 57_R 0.67 0.00
137_I 5_A 0.67 0.00
175_V 114_R 0.66 0.00
44_F 90_L 0.66 0.00
94_E 30_A 0.66 0.00
94_E 44_R 0.66 0.00
46_K 58_E 0.65 0.00
158_P 105_T 0.65 0.00
46_K 20_T 0.65 0.00
76_L 50_E 0.65 0.00
143_G 98_V 0.64 0.00
42_V 5_A 0.64 0.00
106_G 8_E 0.64 0.00
67_L 32_E 0.64 0.00
79_R 14_R 0.64 0.00
156_K 51_A 0.63 0.00
12_G 102_R 0.63 0.00
179_D 49_T 0.63 0.00
84_E 28_A 0.62 0.00
37_V 52_E 0.62 0.00
66_S 98_V 0.62 0.00
90_V 8_E 0.62 0.00
44_F 121_K 0.62 0.00
41_L 54_V 0.62 0.00
25_P 80_R 0.62 0.00
32_H 42_A 0.62 0.00
98_M 76_A 0.61 0.00
76_L 56_L 0.61 0.00
88_F 4_I 0.61 0.00
22_G 66_L 0.61 0.00
108_P 18_A 0.60 0.00
66_S 29_R 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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