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OPENSEQ.org
L25 - S09
UniProt: Q5SHZ1 - P80374
Length: 334
Sequences: 1208
Seq/Len: 3.91
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dZ 3v2eI 3v2fZContact Map
2j002j00I 2j01Z 2j02I 2j03ZContact Map
4juw4juwI 4juxZContact Map
4kix4kixV 4kiyI 4kizV 4kj0I 4kj1V 4kj2I 4kj3V 4kj4IContact Map
4kj54kj5V 4kj6I 4kj7V 4kj8I 4kj9V 4kjaI 4kjbV 4kjcIContact Map
3uyd3uydL 3uyeV 3uyfL 3uygVContact Map
4gd13r8sV 3r8tV 4gd1I 4gd2IContact Map
3ohc3ohcI 3ohdI 3ohjZ 3ohkZContact Map
3knh3knhI 3kniZ 3knjI 3knkZContact Map
3ohy3ohyI 3ohzZ 3oi0I 3oi1ZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
73_Q 125_Y 1.10 0.06
96_V 36_Y 0.97 0.04
102_L 97_K 0.94 0.04
88_F 50_L 0.84 0.03
80_R 109_V 0.81 0.03
159_P 27_T 0.77 0.02
126_V 94_A 0.75 0.02
98_M 46_A 0.72 0.02
124_I 33_F 0.72 0.02
147_G 118_K 0.71 0.02
133_I 70_K 0.71 0.02
33_L 89_N 0.70 0.02
35_R 63_I 0.70 0.02
109_A 19_L 0.69 0.02
55_H 121_R 0.69 0.02
169_E 82_A 0.68 0.01
107_T 13_A 0.68 0.01
42_V 64_T 0.68 0.01
106_G 118_K 0.68 0.01
123_D 54_D 0.67 0.01
139_V 36_Y 0.67 0.01
89_F 53_V 0.67 0.01
172_A 38_Q 0.66 0.01
90_V 39_G 0.66 0.01
128_V 106_A 0.66 0.01
44_F 52_A 0.65 0.01
70_L 12_E 0.65 0.01
127_K 39_G 0.64 0.01
79_R 108_V 0.64 0.01
39_V 34_N 0.64 0.01
131_R 106_A 0.64 0.01
16_S 39_G 0.63 0.01
76_L 33_F 0.63 0.01
64_G 30_G 0.63 0.01
128_V 19_L 0.63 0.01
30_N 17_V 0.62 0.01
164_A 13_A 0.62 0.01
142_S 88_Y 0.62 0.01
56_V 61_A 0.62 0.01
91_L 116_K 0.61 0.01
98_M 97_K 0.61 0.01
32_H 32_D 0.61 0.01
73_Q 27_T 0.61 0.01
105_V 35_E 0.61 0.01
143_G 95_K 0.61 0.01
37_V 121_R 0.61 0.01
129_S 50_L 0.61 0.01
26_G 79_L 0.61 0.01
53_I 64_T 0.61 0.01
171_I 46_A 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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